Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NICN1Q9BSH3 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NICN1Q9BSH3 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NICN1Q9BSH3 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NICN1Q9BSH3 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NICN1Q9BSH3 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NICN1Q9BSH3 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
NICN1Q9BSH3 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NICN1Q9BSH3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NICN1Q9BSH3 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NICN1Q9BSH3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NICN1Q9BSH3 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NICN1Q9BSH3 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC11.79□□□□□ -0.52
NICN1Q9BSH3 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
NICN1Q9BSH3 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
NICN1Q9BSH3 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 RCC2P5-201ENST00000492126 1487 ntBASIC11.78□□□□□ -0.52
NICN1Q9BSH3 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 OR8T1P-201ENST00000421347 918 ntBASIC11.78□□□□□ -0.52
NICN1Q9BSH3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 TSPY25P-201ENST00000429463 745 ntBASIC11.78□□□□□ -0.52
NICN1Q9BSH3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 BNIP3P13-201ENST00000599968 566 ntBASIC11.78□□□□□ -0.52
NICN1Q9BSH3 AL512343.1-201ENST00000605837 169 ntBASIC11.78□□□□□ -0.52
NICN1Q9BSH3 AL157813.1-201ENST00000612996 587 ntBASIC11.78□□□□□ -0.52
NICN1Q9BSH3 AC079336.7-201ENST00000623428 1078 ntBASIC11.78□□□□□ -0.52
NICN1Q9BSH3 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 NRADDP-202ENST00000641269 1585 ntBASIC11.78□□□□□ -0.52
NICN1Q9BSH3 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 AC040160.2-201ENST00000623816 1675 ntBASIC11.78□□□□□ -0.52
NICN1Q9BSH3 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NICN1Q9BSH3 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 KRT8P43-201ENST00000406052 1458 ntBASIC11.77□□□□□ -0.52
NICN1Q9BSH3 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 CTAGE10P-201ENST00000318353 2408 ntBASIC11.77□□□□□ -0.52
NICN1Q9BSH3 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
NICN1Q9BSH3 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms