Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.08□□□□□ -0.48
AP3S1Q92572 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.08□□□□□ -0.48
AP3S1Q92572 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
AP3S1Q92572 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.08□□□□□ -0.48
AP3S1Q92572 DNM1P51-201ENST00000558149 522 ntBASIC12.08□□□□□ -0.48
AP3S1Q92572 AL358472.3-201ENST00000608147 415 ntBASIC12.08□□□□□ -0.48
AP3S1Q92572 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.08□□□□□ -0.48
AP3S1Q92572 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC12.08□□□□□ -0.48
AP3S1Q92572 RBM22P2-201ENST00000393978 1814 ntBASIC12.08□□□□□ -0.48
AP3S1Q92572 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
AP3S1Q92572 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 MSTO2P-201ENST00000314835 1709 ntBASIC12.08□□□□□ -0.48
AP3S1Q92572 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
AP3S1Q92572 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC12.08□□□□□ -0.48
AP3S1Q92572 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC12.07□□□□□ -0.48
AP3S1Q92572 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC12.07□□□□□ -0.48
AP3S1Q92572 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
AP3S1Q92572 SLC7A15P-201ENST00000424028 1363 ntBASIC12.07□□□□□ -0.48
AP3S1Q92572 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC12.07□□□□□ -0.48
AP3S1Q92572 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 HNRNPLP1-201ENST00000421896 1501 ntBASIC12.07□□□□□ -0.48
AP3S1Q92572 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC12.07□□□□□ -0.48
AP3S1Q92572 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
AP3S1Q92572 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 MIR326-201ENST00000362220 95 ntBASIC12.07□□□□□ -0.48
AP3S1Q92572 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.07□□□□□ -0.48
AP3S1Q92572 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
AP3S1Q92572 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.07□□□□□ -0.48
AP3S1Q92572 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.07□□□□□ -0.48
AP3S1Q92572 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.07□□□□□ -0.48
AP3S1Q92572 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
AP3S1Q92572 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.07□□□□□ -0.48
AP3S1Q92572 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.07□□□□□ -0.48
AP3S1Q92572 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 TMEM261P1-201ENST00000604899 340 ntBASIC12.07□□□□□ -0.48
AP3S1Q92572 AC027612.4-201ENST00000605371 583 ntBASIC12.07□□□□□ -0.48
AP3S1Q92572 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 AC091271.1-201ENST00000611877 1162 ntBASIC12.07□□□□□ -0.48
AP3S1Q92572 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC12.07□□□□□ -0.48
AP3S1Q92572 CU634019.7-201ENST00000624153 1185 ntBASIC12.07□□□□□ -0.48
AP3S1Q92572 FP236241.2-201ENST00000624906 1185 ntBASIC12.07□□□□□ -0.48
AP3S1Q92572 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.07□□□□□ -0.48
AP3S1Q92572 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
AP3S1Q92572 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC12.07□□□□□ -0.48
AP3S1Q92572 CSPG4P12-201ENST00000558282 4853 ntBASIC12.07□□□□□ -0.48
AP3S1Q92572 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
AP3S1Q92572 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
AP3S1Q92572 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP3S1Q92572 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
AP3S1Q92572 AL391294.1-201ENST00000641352 4068 ntBASIC12.06□□□□□ -0.48
AP3S1Q92572 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12.06□□□□□ -0.48
AP3S1Q92572 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC12.06□□□□□ -0.48
AP3S1Q92572 CICP18-201ENST00000406017 2812 ntBASIC12.06□□□□□ -0.48
AP3S1Q92572 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC12.06□□□□□ -0.48
AP3S1Q92572 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 POM121L4P-202ENST00000427789 1891 ntBASIC12.06□□□□□ -0.48
AP3S1Q92572 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
AP3S1Q92572 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
AP3S1Q92572 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC12.06□□□□□ -0.48
AP3S1Q92572 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC12.06□□□□□ -0.48
AP3S1Q92572 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
AP3S1Q92572 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.06□□□□□ -0.48
AP3S1Q92572 MIR943-201ENST00000401286 94 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms