Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 USB1-207ENST00000563149 1751 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 AC006372.4-201ENST00000624122 1543 ntBASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 STK24P1-201ENST00000455035 1291 ntBASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 TEKT4P2-202ENST00000559466 1312 ntBASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 PES1-205ENST00000405677 2708 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 PABPC1P2-201ENST00000471997 1805 ntBASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 PISD-203ENST00000397500 2194 ntTSL 5 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 OR2W2P-201ENST00000406313 909 ntBASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 PDIA3P2-201ENST00000428073 158 ntBASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 AC092171.5-201ENST00000608012 942 ntBASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDKAL1Q5VV42 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKAL1Q5VV42 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKAL1Q5VV42 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKAL1Q5VV42 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKAL1Q5VV42 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKAL1Q5VV42 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKAL1Q5VV42 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.86□□□□□ -0.03
CDKAL1Q5VV42 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDKAL1Q5VV42 AC008806.1-201ENST00000624962 2443 ntBASIC14.86□□□□□ -0.03
CDKAL1Q5VV42 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms