Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.99□□□□□ -0.33
CLK1P49759 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CLK1P49759 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 AL008707.1-201ENST00000422498 534 ntBASIC12.99□□□□□ -0.33
CLK1P49759 AC104073.2-201ENST00000453737 312 ntBASIC12.99□□□□□ -0.33
CLK1P49759 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.99□□□□□ -0.33
CLK1P49759 AC009779.1-201ENST00000551138 283 ntBASIC12.99□□□□□ -0.33
CLK1P49759 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.99□□□□□ -0.33
CLK1P49759 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CLK1P49759 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.99□□□□□ -0.33
CLK1P49759 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.99□□□□□ -0.33
CLK1P49759 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CLK1P49759 AC099521.2-201ENST00000619354 2036 ntBASIC12.99□□□□□ -0.33
CLK1P49759 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.99□□□□□ -0.33
CLK1P49759 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.99□□□□□ -0.33
CLK1P49759 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CLK1P49759 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.99□□□□□ -0.33
CLK1P49759 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.99□□□□□ -0.33
CLK1P49759 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.99□□□□□ -0.33
CLK1P49759 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.99□□□□□ -0.33
CLK1P49759 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CLK1P49759 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CLK1P49759 AC018629.1-201ENST00000623381 1736 ntBASIC12.99□□□□□ -0.33
CLK1P49759 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.99□□□□□ -0.33
CLK1P49759 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC12.98□□□□□ -0.33
CLK1P49759 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 NBN-203ENST00000409330 4523 ntTSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
CLK1P49759 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.98□□□□□ -0.33
CLK1P49759 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 DNAJC24-202ENST00000465995 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 AL022313.4-201ENST00000562756 2046 ntBASIC12.98□□□□□ -0.33
CLK1P49759 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CLK1P49759 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CLK1P49759 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.98□□□□□ -0.33
CLK1P49759 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.98□□□□□ -0.33
CLK1P49759 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.98□□□□□ -0.33
CLK1P49759 AC006033.1-201ENST00000440505 426 ntBASIC12.98□□□□□ -0.33
CLK1P49759 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.98□□□□□ -0.33
CLK1P49759 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.98□□□□□ -0.33
CLK1P49759 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.98□□□□□ -0.33
CLK1P49759 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.98□□□□□ -0.33
CLK1P49759 AL512310.5-201ENST00000551999 515 ntBASIC12.98□□□□□ -0.33
CLK1P49759 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.98□□□□□ -0.33
CLK1P49759 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.98□□□□□ -0.33
CLK1P49759 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CLK1P49759 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.98□□□□□ -0.33
CLK1P49759 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CLK1P49759 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CLK1P49759 PI4KAP2-201ENST00000360806 2080 ntBASIC12.98□□□□□ -0.33
CLK1P49759 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 AC008620.2-201ENST00000510294 1569 ntBASIC12.98□□□□□ -0.33
CLK1P49759 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.98□□□□□ -0.33
CLK1P49759 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.98□□□□□ -0.33
CLK1P49759 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms