Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CASP4P49662 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CASP4P49662 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CASP4P49662 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.89□□□□□ -0.03
CASP4P49662 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC14.88□□□□□ -0.03
CASP4P49662 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC14.88□□□□□ -0.03
CASP4P49662 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC14.88□□□□□ -0.03
CASP4P49662 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.88□□□□□ -0.03
CASP4P49662 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 AC069218.1-201ENST00000435269 762 ntBASIC14.88□□□□□ -0.03
CASP4P49662 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.88□□□□□ -0.03
CASP4P49662 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.88□□□□□ -0.03
CASP4P49662 NOC2LP1-201ENST00000450578 752 ntBASIC14.88□□□□□ -0.03
CASP4P49662 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CASP4P49662 RNA5SP406-201ENST00000516106 112 ntBASIC14.88□□□□□ -0.03
CASP4P49662 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.88□□□□□ -0.03
CASP4P49662 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14.88□□□□□ -0.03
CASP4P49662 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.88□□□□□ -0.03
CASP4P49662 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.88□□□□□ -0.03
CASP4P49662 AC092171.5-201ENST00000608012 942 ntBASIC14.88□□□□□ -0.03
CASP4P49662 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC14.88□□□□□ -0.03
CASP4P49662 AP000322.3-201ENST00000608665 388 ntBASIC14.88□□□□□ -0.03
CASP4P49662 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.88□□□□□ -0.03
CASP4P49662 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.88□□□□□ -0.03
CASP4P49662 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.88□□□□□ -0.03
CASP4P49662 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.88□□□□□ -0.03
CASP4P49662 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CASP4P49662 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.88□□□□□ -0.03
CASP4P49662 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CASP4P49662 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CASP4P49662 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC14.88□□□□□ -0.03
CASP4P49662 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CASP4P49662 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
CASP4P49662 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CASP4P49662 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CASP4P49662 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CASP4P49662 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CASP4P49662 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC14.87□□□□□ -0.03
CASP4P49662 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CASP4P49662 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CASP4P49662 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.87□□□□□ -0.03
CASP4P49662 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.87□□□□□ -0.03
CASP4P49662 Z69890.1-201ENST00000382990 339 ntBASIC14.87□□□□□ -0.03
CASP4P49662 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.87□□□□□ -0.03
CASP4P49662 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.87□□□□□ -0.03
CASP4P49662 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.87□□□□□ -0.03
CASP4P49662 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.87□□□□□ -0.03
CASP4P49662 MAGEA5-201ENST00000446757 942 ntBASIC14.87□□□□□ -0.03
CASP4P49662 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.87□□□□□ -0.03
CASP4P49662 RPL18AP3-201ENST00000462885 528 ntBASIC14.87□□□□□ -0.03
CASP4P49662 TMCO5B-205ENST00000530020 894 ntBASIC14.87□□□□□ -0.03
CASP4P49662 CR383656.3-201ENST00000551315 183 ntBASIC14.87□□□□□ -0.03
CASP4P49662 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CASP4P49662 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.87□□□□□ -0.03
CASP4P49662 RN7SL357P-201ENST00000581065 298 ntBASIC14.87□□□□□ -0.03
CASP4P49662 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.87□□□□□ -0.03
CASP4P49662 AC073352.2-201ENST00000609385 439 ntBASIC14.87□□□□□ -0.03
CASP4P49662 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CASP4P49662 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.87□□□□□ -0.03
CASP4P49662 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC14.87□□□□□ -0.03
CASP4P49662 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CASP4P49662 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CASP4P49662 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CASP4P49662 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CASP4P49662 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms