Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.25□□□□□ -0.13
MMP13P45452 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.25□□□□□ -0.13
MMP13P45452 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.25□□□□□ -0.13
MMP13P45452 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.25□□□□□ -0.13
MMP13P45452 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.25□□□□□ -0.13
MMP13P45452 AC098934.1-203ENST00000442868 1262 ntBASIC14.25□□□□□ -0.13
MMP13P45452 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.25□□□□□ -0.13
MMP13P45452 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.25□□□□□ -0.13
MMP13P45452 FTH1P22-201ENST00000456305 520 ntBASIC14.25□□□□□ -0.13
MMP13P45452 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.25□□□□□ -0.13
MMP13P45452 AC022494.1-201ENST00000466044 728 ntBASIC14.25□□□□□ -0.13
MMP13P45452 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
MMP13P45452 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.25□□□□□ -0.13
MMP13P45452 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.25□□□□□ -0.13
MMP13P45452 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.25□□□□□ -0.13
MMP13P45452 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
MMP13P45452 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC14.25□□□□□ -0.13
MMP13P45452 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC14.25□□□□□ -0.13
MMP13P45452 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.25□□□□□ -0.13
MMP13P45452 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC14.25□□□□□ -0.13
MMP13P45452 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC14.25□□□□□ -0.13
MMP13P45452 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MMP13P45452 DDX12P-201ENST00000432996 2947 ntBASIC14.25□□□□□ -0.13
MMP13P45452 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
MMP13P45452 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.24□□□□□ -0.13
MMP13P45452 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.24□□□□□ -0.13
MMP13P45452 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
MMP13P45452 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
MMP13P45452 MANEA-AS1-201ENST00000564541 2268 ntBASIC14.24□□□□□ -0.13
MMP13P45452 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.24□□□□□ -0.13
MMP13P45452 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
MMP13P45452 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
MMP13P45452 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
MMP13P45452 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.24□□□□□ -0.13
MMP13P45452 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.24□□□□□ -0.13
MMP13P45452 CEP164P1-201ENST00000455142 418 ntBASIC14.24□□□□□ -0.13
MMP13P45452 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.24□□□□□ -0.13
MMP13P45452 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
MMP13P45452 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.24□□□□□ -0.13
MMP13P45452 IGLV3-15-201ENST00000518356 244 ntBASIC14.24□□□□□ -0.13
MMP13P45452 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.24□□□□□ -0.13
MMP13P45452 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.24□□□□□ -0.13
MMP13P45452 AC145285.5-201ENST00000562217 361 ntBASIC14.24□□□□□ -0.13
MMP13P45452 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.24□□□□□ -0.13
MMP13P45452 SIGLEC22P-201ENST00000599104 714 ntBASIC14.24□□□□□ -0.13
MMP13P45452 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.24□□□□□ -0.13
MMP13P45452 AC009560.1-201ENST00000620208 434 ntBASIC14.24□□□□□ -0.13
MMP13P45452 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.24□□□□□ -0.13
MMP13P45452 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.24□□□□□ -0.13
MMP13P45452 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC14.24□□□□□ -0.13
MMP13P45452 AL031432.4-201ENST00000641729 2190 ntBASIC14.24□□□□□ -0.13
MMP13P45452 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
MMP13P45452 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC14.24□□□□□ -0.13
MMP13P45452 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MMP13P45452 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
MMP13P45452 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP13P45452 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC14.23□□□□□ -0.13
MMP13P45452 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
MMP13P45452 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC14.23□□□□□ -0.13
MMP13P45452 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC14.23□□□□□ -0.13
MMP13P45452 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.23□□□□□ -0.13
MMP13P45452 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.23□□□□□ -0.13
MMP13P45452 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.23□□□□□ -0.13
MMP13P45452 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms