Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
MTHFRP42898 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MTHFRP42898 FAU-201ENST00000279259 461 ntTSL 2 BASIC14.27□□□□□ -0.13
MTHFRP42898 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MTHFRP42898 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MTHFRP42898 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC14.27□□□□□ -0.13
MTHFRP42898 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MTHFRP42898 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
MTHFRP42898 ASS1P1-201ENST00000402854 1237 ntBASIC14.27□□□□□ -0.13
MTHFRP42898 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
MTHFRP42898 SDCBP2P1-201ENST00000416115 614 ntBASIC14.27□□□□□ -0.13
MTHFRP42898 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC14.27□□□□□ -0.13
MTHFRP42898 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.27□□□□□ -0.13
MTHFRP42898 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC14.27□□□□□ -0.13
MTHFRP42898 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MTHFRP42898 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
MTHFRP42898 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC14.27□□□□□ -0.13
MTHFRP42898 DPY19L2P4-201ENST00000479881 442 ntBASIC14.27□□□□□ -0.13
MTHFRP42898 NDUFB2P1-201ENST00000506966 295 ntBASIC14.27□□□□□ -0.13
MTHFRP42898 AC011431.1-201ENST00000512971 230 ntBASIC14.27□□□□□ -0.13
MTHFRP42898 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC14.27□□□□□ -0.13
MTHFRP42898 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC14.27□□□□□ -0.13
MTHFRP42898 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC14.27□□□□□ -0.13
MTHFRP42898 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC14.27□□□□□ -0.13
MTHFRP42898 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MTHFRP42898 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC14.27□□□□□ -0.13
MTHFRP42898 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC14.27□□□□□ -0.13
MTHFRP42898 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC14.27□□□□□ -0.13
MTHFRP42898 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC14.27□□□□□ -0.13
MTHFRP42898 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC14.27□□□□□ -0.13
MTHFRP42898 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MTHFRP42898 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC14.27□□□□□ -0.13
MTHFRP42898 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC14.27□□□□□ -0.13
MTHFRP42898 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
MTHFRP42898 BX322562.1-201ENST00000617004 561 ntBASIC14.27□□□□□ -0.13
MTHFRP42898 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC14.27□□□□□ -0.13
MTHFRP42898 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MTHFRP42898 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC14.27□□□□□ -0.13
MTHFRP42898 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.27□□□□□ -0.13
MTHFRP42898 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MTHFRP42898 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MTHFRP42898 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.27□□□□□ -0.13
MTHFRP42898 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MTHFRP42898 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
MTHFRP42898 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MTHFRP42898 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.27□□□□□ -0.13
MTHFRP42898 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
MTHFRP42898 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MTHFRP42898 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
MTHFRP42898 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
MTHFRP42898 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.26□□□□□ -0.13
MTHFRP42898 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.26□□□□□ -0.13
MTHFRP42898 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 KRT8P42-201ENST00000405771 1399 ntBASIC14.26□□□□□ -0.13
MTHFRP42898 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
MTHFRP42898 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.26□□□□□ -0.13
MTHFRP42898 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MTHFRP42898 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC14.26□□□□□ -0.13
MTHFRP42898 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC14.26□□□□□ -0.13
MTHFRP42898 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC14.26□□□□□ -0.13
MTHFRP42898 AC000077.1-201ENST00000420012 953 ntBASIC14.26□□□□□ -0.13
MTHFRP42898 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC14.26□□□□□ -0.13
MTHFRP42898 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC14.26□□□□□ -0.13
MTHFRP42898 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC14.26□□□□□ -0.13
MTHFRP42898 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC14.26□□□□□ -0.13
MTHFRP42898 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC14.26□□□□□ -0.13
MTHFRP42898 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC14.26□□□□□ -0.13
MTHFRP42898 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.26□□□□□ -0.13
MTHFRP42898 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MTHFRP42898 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MTHFRP42898 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
MTHFRP42898 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC14.26□□□□□ -0.13
MTHFRP42898 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.26□□□□□ -0.13
MTHFRP42898 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
MTHFRP42898 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms