Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 FAU-202ENST00000434372 533 ntTSL 2 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 PHBP18-201ENST00000546648 813 ntBASIC15.98■□□□□ 0.15
HLA-DOAP06340 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 MIR4746-201ENST00000579802 71 ntBASIC15.98■□□□□ 0.15
HLA-DOAP06340 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 BX322534.1-201ENST00000635574 241 ntBASIC15.98■□□□□ 0.15
HLA-DOAP06340 AC215524.1-201ENST00000635696 241 ntBASIC15.98■□□□□ 0.15
HLA-DOAP06340 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 RHPN1-AS1-201ENST00000518049 1918 ntBASIC15.98■□□□□ 0.15
HLA-DOAP06340 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DOAP06340 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HLA-DOAP06340 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HLA-DOAP06340 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HLA-DOAP06340 AL359881.3-201ENST00000602640 1721 ntBASIC15.97■□□□□ 0.15
HLA-DOAP06340 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
HLA-DOAP06340 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DOAP06340 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.97■□□□□ 0.15
HLA-DOAP06340 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 AC012358.2-201ENST00000430010 1434 ntBASIC15.97■□□□□ 0.15
HLA-DOAP06340 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HLA-DOAP06340 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DOAP06340 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HLA-DOAP06340 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HLA-DOAP06340 AC234644.1-201ENST00000406065 370 ntBASIC15.97■□□□□ 0.15
HLA-DOAP06340 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
HLA-DOAP06340 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
HLA-DOAP06340 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DOAP06340 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC15.97■□□□□ 0.15
HLA-DOAP06340 AC010531.8-201ENST00000623341 685 ntBASIC15.97■□□□□ 0.15
HLA-DOAP06340 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HLA-DOAP06340 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DOAP06340 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 AC008038.1-201ENST00000634247 1314 ntBASIC15.96■□□□□ 0.15
HLA-DOAP06340 AP000437.1-201ENST00000624057 2085 ntBASIC15.96■□□□□ 0.15
HLA-DOAP06340 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 BEND3P1-201ENST00000421591 1944 ntBASIC15.96■□□□□ 0.15
HLA-DOAP06340 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms