Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 FCHO2-201ENST00000287761 1287 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 MIR645-201ENST00000385283 94 ntBASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 DUTP3-201ENST00000450025 415 ntBASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AC108729.2-201ENST00000476543 840 ntBASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 NUP210P1-202ENST00000504322 710 ntBASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AC242376.1-201ENST00000559033 726 ntBASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AC110760.3-201ENST00000598794 467 ntBASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AL133507.1-201ENST00000605269 557 ntBASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AC242988.1-201ENST00000611044 714 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AC090246.1-201ENST00000616499 426 ntBASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AL139424.3-202ENST00000641619 917 ntBASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 C8orf49-201ENST00000525043 1968 ntBASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB13Q9Y5F0 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 KRT8P43-201ENST00000406052 1458 ntBASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 FMO6P-201ENST00000236166 1620 ntBASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB13Q9Y5F0 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms