Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 RNA5SP423-201ENST00000517127 109 ntBASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 RN7SL163P-201ENST00000583100 276 ntBASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 AC068587.8-201ENST00000641239 219 ntBASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 AC004923.1-202ENST00000642106 209 ntBASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
AMBRA1Q9C0C7 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 AC138028.6-201ENST00000616106 1482 ntBASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 LINC02228-202ENST00000641261 2489 ntBASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 AC067931.2-201ENST00000623655 2003 ntBASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 RPS9P1-201ENST00000419943 583 ntBASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 CALR4P-201ENST00000431943 946 ntBASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 BX284668.4-201ENST00000453917 508 ntBASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 IGHJ2P-201ENST00000454480 60 ntBASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 AC106794.1-201ENST00000506935 792 ntBASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 AC005740.1-201ENST00000515639 522 ntBASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 AC013355.1-201ENST00000562625 723 ntBASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 AC244452.3-201ENST00000636814 210 ntBASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 AC245140.2-201ENST00000624054 1939 ntBASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 AF013593.1-201ENST00000458074 1487 ntBASIC12.85□□□□□ -0.35
AMBRA1Q9C0C7 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12.84□□□□□ -0.35
AMBRA1Q9C0C7 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.84□□□□□ -0.35
AMBRA1Q9C0C7 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AMBRA1Q9C0C7 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AMBRA1Q9C0C7 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AMBRA1Q9C0C7 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
AMBRA1Q9C0C7 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
AMBRA1Q9C0C7 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AMBRA1Q9C0C7 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AMBRA1Q9C0C7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AMBRA1Q9C0C7 IL9RP3-201ENST00000442856 1674 ntBASIC12.84□□□□□ -0.35
AMBRA1Q9C0C7 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms