Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 AC104590.1-202ENST00000558368 1921 ntBASIC11.16□□□□□ -0.62
RAB40CQ96S21 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 AC092933.1-201ENST00000393644 945 ntBASIC11.16□□□□□ -0.62
RAB40CQ96S21 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 CNN2P8-201ENST00000421872 913 ntBASIC11.16□□□□□ -0.62
RAB40CQ96S21 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 AC016694.1-201ENST00000434179 700 ntBASIC11.16□□□□□ -0.62
RAB40CQ96S21 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 OARD1-212ENST00000482515 832 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 USP32P1-208ENST00000506594 1164 ntBASIC11.16□□□□□ -0.62
RAB40CQ96S21 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 CTAGE10P-201ENST00000318353 2408 ntBASIC11.16□□□□□ -0.62
RAB40CQ96S21 AC011700.1-201ENST00000610409 2627 ntBASIC11.16□□□□□ -0.62
RAB40CQ96S21 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB40CQ96S21 CYP4F23P-201ENST00000593402 1579 ntBASIC11.16□□□□□ -0.62
RAB40CQ96S21 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RAB40CQ96S21 AL845472.1-202ENST00000624675 4080 ntBASIC11.15□□□□□ -0.62
RAB40CQ96S21 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 API5-208ENST00000531273 1868 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 MAX-212ENST00000555932 1673 ntTSL 5 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 AC011742.3-201ENST00000439053 820 ntBASIC11.15□□□□□ -0.62
RAB40CQ96S21 HNRNPA1P36-201ENST00000521313 955 ntBASIC11.15□□□□□ -0.62
RAB40CQ96S21 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 CMC2-204ENST00000562713 573 ntTSL 3 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 APRT-204ENST00000563655 709 ntTSL 5 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 CMC2-209ENST00000565108 399 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms