Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 DDC-206ENST00000431062 1620 ntTSL 5 BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
VPS8Q8N3P4 ATF4P4-201ENST00000393544 1930 ntBASIC20.88■□□□□ 0.93
VPS8Q8N3P4 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 GGT8P-201ENST00000418938 532 ntBASIC20.88■□□□□ 0.93
VPS8Q8N3P4 PRDX2P3-201ENST00000515779 586 ntBASIC20.88■□□□□ 0.93
VPS8Q8N3P4 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS8Q8N3P4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 RNA5SP84-201ENST00000364740 107 ntBASIC20.87■□□□□ 0.93
VPS8Q8N3P4 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 RN7SL789P-201ENST00000478944 293 ntBASIC20.87■□□□□ 0.93
VPS8Q8N3P4 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 CDCA4P4-201ENST00000435216 680 ntBASIC20.87■□□□□ 0.93
VPS8Q8N3P4 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 HLA-W-207ENST00000439514 771 ntBASIC20.87■□□□□ 0.93
VPS8Q8N3P4 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 AC233724.9-201ENST00000511694 407 ntBASIC20.87■□□□□ 0.93
VPS8Q8N3P4 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 ETV2-207ENST00000619399 994 ntTSL 5 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 AC008622.3-201ENST00000621170 600 ntBASIC20.87■□□□□ 0.93
VPS8Q8N3P4 AC048382.6-201ENST00000621980 1223 ntBASIC20.87■□□□□ 0.93
VPS8Q8N3P4 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC20.87■□□□□ 0.93
VPS8Q8N3P4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 AHCYP7-201ENST00000560847 1308 ntBASIC20.86■□□□□ 0.93
VPS8Q8N3P4 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 AF274858.1-201ENST00000406288 372 ntBASIC20.86■□□□□ 0.93
VPS8Q8N3P4 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms