Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 AC089987.1-201ENST00000551654 2209 ntBASIC14.59□□□□□ -0.07
RNF135Q8IUD6 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 HLF-202ENST00000430986 1385 ntTSL 2 BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
RNF135Q8IUD6 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.58□□□□□ -0.07
RNF135Q8IUD6 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.58□□□□□ -0.07
RNF135Q8IUD6 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
RNF135Q8IUD6 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RNF135Q8IUD6 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RNF135Q8IUD6 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
RNF135Q8IUD6 AL359881.3-201ENST00000602640 1721 ntBASIC14.58□□□□□ -0.07
RNF135Q8IUD6 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.58□□□□□ -0.07
RNF135Q8IUD6 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 CASP2-203ENST00000392925 616 ntTSL 3 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 AC025594.1-201ENST00000469533 543 ntBASIC14.58□□□□□ -0.08
RNF135Q8IUD6 AC005740.1-201ENST00000515639 522 ntBASIC14.58□□□□□ -0.08
RNF135Q8IUD6 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 BAK1P2-201ENST00000532665 631 ntBASIC14.58□□□□□ -0.08
RNF135Q8IUD6 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 AC142086.5-202ENST00000562500 217 ntBASIC14.58□□□□□ -0.08
RNF135Q8IUD6 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 CCT8L1P-201ENST00000465400 1674 ntBASIC14.58□□□□□ -0.08
RNF135Q8IUD6 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.58□□□□□ -0.08
RNF135Q8IUD6 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 DKKL1P1-201ENST00000400550 698 ntBASIC14.57□□□□□ -0.08
RNF135Q8IUD6 BX679664.3-201ENST00000414070 555 ntBASIC14.57□□□□□ -0.08
RNF135Q8IUD6 AC092573.1-201ENST00000433054 884 ntBASIC14.57□□□□□ -0.08
RNF135Q8IUD6 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 AC113935.1-201ENST00000471722 555 ntBASIC14.57□□□□□ -0.08
RNF135Q8IUD6 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 AP000920.1-201ENST00000531824 344 ntBASIC14.57□□□□□ -0.08
RNF135Q8IUD6 AL512324.3-201ENST00000619383 882 ntBASIC14.57□□□□□ -0.08
RNF135Q8IUD6 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RNF135Q8IUD6 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms