Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 ZNF669-204ENST00000448299 1718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 CHMP2A-201ENST00000312547 913 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 PRSS3-203ENST00000379405 834 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 AL132656.1-201ENST00000452173 490 ntBASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 NDUFC2-KCTD14-201ENST00000528251 566 ntTSL 4 BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 AC103706.1-201ENST00000561761 679 ntBASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 CTBP2P7-201ENST00000593270 1244 ntBASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 DANCR-205ENST00000623036 748 ntTSL 5 BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC12.28□□□□□ -0.44
ZFHX4Q86UP3 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 AC023830.3-201ENST00000612995 1455 ntBASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 NEDD8-MDP1-202ENST00000534348 595 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 AL137785.1-201ENST00000637466 490 ntTSL 5 BASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 AC090643.2-201ENST00000623442 2029 ntBASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.27□□□□□ -0.44
ZFHX4Q86UP3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 AC061965.1-201ENST00000560524 1465 ntBASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 AL118505.1-201ENST00000619370 1932 ntBASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 MT1XP1-201ENST00000421314 186 ntBASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 AL356653.1-201ENST00000402743 360 ntBASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC12.27□□□□□ -0.45
ZFHX4Q86UP3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 CYP2B7P-201ENST00000541697 1476 ntBASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 AL353801.2-201ENST00000436877 1444 ntTSL 5 BASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 POM121L14P-201ENST00000406100 1558 ntBASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 NME1-201ENST00000013034 796 ntTSL 3 BASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 AL031727.2-201ENST00000416470 207 ntTSL 2 BASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 TGIF2P1-201ENST00000435390 685 ntBASIC12.26□□□□□ -0.45
ZFHX4Q86UP3 AC114781.1-201ENST00000450559 1028 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms