Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 KRT18P45-201ENST00000515347 1333 ntBASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 AC008038.1-201ENST00000634247 1314 ntBASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.13□□□□□ -0.31
RSPO4Q2I0M5 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 AL356583.1-201ENST00000398739 1371 ntBASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 AC215219.1-201ENST00000400706 1817 ntBASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 MTHFD2P7-201ENST00000483867 983 ntBASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 HNRNPA1P4-201ENST00000509706 756 ntBASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 RN7SL5P-201ENST00000581458 321 ntBASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RSPO4Q2I0M5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 KRT8P42-201ENST00000405771 1399 ntBASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AC068760.1-201ENST00000493579 1953 ntBASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AC004884.1-201ENST00000393647 319 ntBASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 MYADML-201ENST00000474610 2147 ntBASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AC009238.3-201ENST00000512705 217 ntBASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 IGHV7-56-201ENST00000518372 351 ntBASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 RN7SL460P-201ENST00000582806 258 ntBASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 RN7SL322P-201ENST00000583519 299 ntBASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AL589743.3-201ENST00000604121 517 ntBASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 MYO15B-237ENST00000642007 4893 ntBASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 TBC1D3P1-201ENST00000590047 1693 ntBASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms