Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC14.31□□□□□ -0.12
RB1P06400 RPL3P9-201ENST00000463217 1183 ntBASIC14.31□□□□□ -0.12
RB1P06400 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC14.31□□□□□ -0.12
RB1P06400 CETN3-205ENST00000522842 664 ntTSL 2 BASIC14.31□□□□□ -0.12
RB1P06400 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC14.31□□□□□ -0.12
RB1P06400 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC14.31□□□□□ -0.12
RB1P06400 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.31□□□□□ -0.12
RB1P06400 NAA38-204ENST00000575208 529 ntTSL 3 BASIC14.31□□□□□ -0.12
RB1P06400 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC14.31□□□□□ -0.12
RB1P06400 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC14.31□□□□□ -0.12
RB1P06400 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC14.31□□□□□ -0.12
RB1P06400 NF1P11-201ENST00000621292 1282 ntBASIC14.31□□□□□ -0.12
RB1P06400 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC14.31□□□□□ -0.12
RB1P06400 Z82244.2-201ENST00000632196 448 ntBASIC14.31□□□□□ -0.12
RB1P06400 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RB1P06400 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.31□□□□□ -0.12
RB1P06400 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 AC012358.2-201ENST00000430010 1434 ntBASIC14.31□□□□□ -0.12
RB1P06400 LINC02486-201ENST00000604157 3000 ntBASIC14.31□□□□□ -0.12
RB1P06400 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RB1P06400 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.31□□□□□ -0.12
RB1P06400 AC015656.1-201ENST00000624209 3578 ntBASIC14.31□□□□□ -0.12
RB1P06400 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RB1P06400 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.3□□□□□ -0.12
RB1P06400 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.3□□□□□ -0.12
RB1P06400 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RB1P06400 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC14.3□□□□□ -0.12
RB1P06400 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.3□□□□□ -0.12
RB1P06400 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RB1P06400 AC005912.2-201ENST00000619492 2400 ntBASIC14.3□□□□□ -0.12
RB1P06400 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RB1P06400 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.3□□□□□ -0.12
RB1P06400 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.3□□□□□ -0.12
RB1P06400 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RB1P06400 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
RB1P06400 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC14.3□□□□□ -0.12
RB1P06400 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC14.3□□□□□ -0.12
RB1P06400 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC14.3□□□□□ -0.12
RB1P06400 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
RB1P06400 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 SLC25A15P1-201ENST00000456738 342 ntBASIC14.3□□□□□ -0.12
RB1P06400 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC14.3□□□□□ -0.12
RB1P06400 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC14.3□□□□□ -0.12
RB1P06400 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 SLC25A51P3-201ENST00000521814 889 ntBASIC14.3□□□□□ -0.12
RB1P06400 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC14.3□□□□□ -0.12
RB1P06400 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
RB1P06400 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC14.3□□□□□ -0.12
RB1P06400 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC14.3□□□□□ -0.12
RB1P06400 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC14.3□□□□□ -0.12
RB1P06400 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC14.3□□□□□ -0.12
RB1P06400 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.3□□□□□ -0.12
RB1P06400 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RB1P06400 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RB1P06400 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.3□□□□□ -0.12
RB1P06400 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RB1P06400 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RB1P06400 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RB1P06400 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.29□□□□□ -0.12
RB1P06400 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RB1P06400 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RB1P06400 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RB1P06400 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC14.29□□□□□ -0.12
RB1P06400 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RB1P06400 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RB1P06400 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RB1P06400 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.29□□□□□ -0.12
RB1P06400 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RB1P06400 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RB1P06400 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RB1P06400 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms