Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC10.16□□□□□ -0.78
NACAE9PAV3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC10.16□□□□□ -0.78
NACAE9PAV3 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 AHCYP4-201ENST00000419201 1315 ntBASIC10.16□□□□□ -0.78
NACAE9PAV3 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
NACAE9PAV3 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
NACAE9PAV3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC10.16□□□□□ -0.78
NACAE9PAV3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 FXNP2-201ENST00000411625 547 ntBASIC10.16□□□□□ -0.78
NACAE9PAV3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 RN7SL11P-201ENST00000471305 293 ntBASIC10.16□□□□□ -0.78
NACAE9PAV3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 AC125604.1-201ENST00000496255 707 ntBASIC10.16□□□□□ -0.78
NACAE9PAV3 AC116345.2-201ENST00000512837 523 ntBASIC10.16□□□□□ -0.78
NACAE9PAV3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC10.16□□□□□ -0.78
NACAE9PAV3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
NACAE9PAV3 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC10.16□□□□□ -0.78
NACAE9PAV3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
NACAE9PAV3 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC10.16□□□□□ -0.78
NACAE9PAV3 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC10.16□□□□□ -0.78
NACAE9PAV3 AL157813.1-201ENST00000612996 587 ntBASIC10.16□□□□□ -0.78
NACAE9PAV3 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC10.16□□□□□ -0.78
NACAE9PAV3 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 DUT-208ENST00000559540 1441 ntTSL 2 BASIC10.15□□□□□ -0.78
NACAE9PAV3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC10.15□□□□□ -0.78
NACAE9PAV3 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
NACAE9PAV3 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC10.15□□□□□ -0.78
NACAE9PAV3 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC10.15□□□□□ -0.78
NACAE9PAV3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC10.15□□□□□ -0.78
NACAE9PAV3 SATB2-AS1-205ENST00000450728 3314 ntTSL 2 BASIC10.15□□□□□ -0.78
NACAE9PAV3 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
NACAE9PAV3 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC10.15□□□□□ -0.78
NACAE9PAV3 TECPR2-201ENST00000359520 8686 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 AL139158.3-201ENST00000641212 1562 ntBASIC10.15□□□□□ -0.78
NACAE9PAV3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC10.15□□□□□ -0.78
NACAE9PAV3 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
NACAE9PAV3 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
NACAE9PAV3 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC10.15□□□□□ -0.78
NACAE9PAV3 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC10.15□□□□□ -0.78
NACAE9PAV3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
NACAE9PAV3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
NACAE9PAV3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 HMGA1P1-201ENST00000415560 1062 ntBASIC10.15□□□□□ -0.78
NACAE9PAV3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC10.15□□□□□ -0.78
NACAE9PAV3 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 FTLP1-201ENST00000449155 526 ntBASIC10.15□□□□□ -0.78
NACAE9PAV3 AL353637.1-201ENST00000451571 732 ntBASIC10.15□□□□□ -0.78
NACAE9PAV3 ATP6V0CP2-201ENST00000469409 207 ntBASIC10.15□□□□□ -0.78
NACAE9PAV3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC10.15□□□□□ -0.78
NACAE9PAV3 HNRNPA1P36-201ENST00000521313 955 ntBASIC10.15□□□□□ -0.78
NACAE9PAV3 AC003686.1-201ENST00000550956 1034 ntBASIC10.15□□□□□ -0.78
NACAE9PAV3 MIR3907-201ENST00000579424 151 ntBASIC10.15□□□□□ -0.78
NACAE9PAV3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC10.15□□□□□ -0.78
NACAE9PAV3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC10.15□□□□□ -0.78
NACAE9PAV3 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC10.15□□□□□ -0.78
NACAE9PAV3 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 DCAF6-204ENST00000432587 3522 ntTSL 2 BASIC10.15□□□□□ -0.78
NACAE9PAV3 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
NACAE9PAV3 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
NACAE9PAV3 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC10.15□□□□□ -0.78
NACAE9PAV3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NACAE9PAV3 EFL1-201ENST00000268206 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
NACAE9PAV3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC10.15□□□□□ -0.79
NACAE9PAV3 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
NACAE9PAV3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.15□□□□□ -0.79
NACAE9PAV3 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
NACAE9PAV3 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms