Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 AD000091.1-201ENST00000592379 287 ntBASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 PPP1R32-203ENST00000432063 1472 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
BIVM-ERCC5R4GMW8 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 PCDHB19P-202ENST00000625133 2914 ntBASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 AC026271.4-201ENST00000578214 1833 ntBASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 AC064836.1-201ENST00000405197 704 ntBASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 RAET1G-203ENST00000479265 1078 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 BEND3P3-201ENST00000611030 2440 ntBASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 FAM156A-203ENST00000611661 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 LINC02465-203ENST00000513875 1777 ntTSL 5 BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 GPR119-201ENST00000276218 1008 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 AC133548.2-202ENST00000562267 148 ntBASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 RN7SL460P-201ENST00000582806 258 ntBASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC21.73■■□□□ 1.07
BIVM-ERCC5R4GMW8 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 AC100774.1-201ENST00000565581 1603 ntBASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 ANKRD26P3-201ENST00000454044 2748 ntBASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 MBL3P-201ENST00000402234 644 ntBASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 PHBP11-201ENST00000420550 809 ntBASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 AC139143.1-201ENST00000441772 1207 ntBASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 ZEB1-AS1-207ENST00000606286 476 ntTSL 4 BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 ACAA2-205ENST00000587994 1657 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
BIVM-ERCC5R4GMW8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BIVM-ERCC5R4GMW8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
BIVM-ERCC5R4GMW8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BIVM-ERCC5R4GMW8 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BIVM-ERCC5R4GMW8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
BIVM-ERCC5R4GMW8 MAS1LP1-206ENST00000419416 1047 ntBASIC21.71■■□□□ 1.07
BIVM-ERCC5R4GMW8 LINC01046-201ENST00000443719 405 ntTSL 3 BASIC21.71■■□□□ 1.07
BIVM-ERCC5R4GMW8 TMEM91-206ENST00000447302 721 ntTSL 2 BASIC21.71■■□□□ 1.07
BIVM-ERCC5R4GMW8 EEF1GP2-201ENST00000509352 1243 ntBASIC21.71■■□□□ 1.07
BIVM-ERCC5R4GMW8 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC21.71■■□□□ 1.07
BIVM-ERCC5R4GMW8 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC21.71■■□□□ 1.07
BIVM-ERCC5R4GMW8 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC21.71■■□□□ 1.07
BIVM-ERCC5R4GMW8 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms