Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 DANCR-205ENST00000623036 748 ntTSL 5 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 GOSR2-242ENST00000640711 1083 ntTSL 5 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 MIPEPP1-201ENST00000413533 2027 ntBASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 HLA-DQA2-210ENST00000374940 1524 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 AL445989.1-201ENST00000611641 1436 ntBASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 PXK-210ENST00000479241 2817 ntTSL 2 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 CEP70-208ENST00000474781 2028 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 NDUFAF3-201ENST00000326912 705 ntTSL 2 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 PRPS1-201ENST00000372418 942 ntTSL 3 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 AL356056.2-202ENST00000430188 553 ntTSL 2 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 AC009171.2-201ENST00000573220 318 ntTSL 3 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 LDAH-213ENST00000626491 1179 ntTSL 2 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 AL132639.2-201ENST00000605298 1359 ntBASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 MOCS1P1-201ENST00000564020 1612 ntBASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 HIST1H1E-201ENST00000304218 754 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 AL356417.2-201ENST00000419064 395 ntTSL 2 BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 CD59-205ENST00000437761 758 ntAPPRIS P2 TSL 4 BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 TMEM256P2-201ENST00000440241 341 ntBASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 CFL1P2-201ENST00000440986 684 ntBASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 AL669970.2-201ENST00000446184 280 ntTSL 3 BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 AL731577.1-201ENST00000449984 830 ntTSL 5 BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 SDHD-205ENST00000528048 905 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 AC084879.1-203ENST00000550470 1257 ntTSL 5 BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 MIR3177-201ENST00000578255 82 ntBASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 PITPNC1-204ENST00000581322 1124 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 LINC00539-204ENST00000608957 869 ntTSL 5 BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 SLC16A1-AS1-207ENST00000627431 1073 ntTSL 5 BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 CCDC144NL-AS1-216ENST00000582583 1670 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RIMBP3Q9UFD9 RAD9B-202ENST00000392672 1846 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 FUNDC2P1-201ENST00000327891 570 ntBASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 APH1B-203ENST00000380343 685 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 MPDU1-203ENST00000396501 1125 ntTSL 2 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 AL355001.1-201ENST00000422148 444 ntTSL 5 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 ADH5P2-201ENST00000425922 1124 ntBASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 MRPS22-202ENST00000465056 1099 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 TMED5-204ENST00000479918 1296 ntTSL 3 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 NR1H3-230ENST00000527949 1065 ntTSL 2 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 AL110504.1-201ENST00000557733 889 ntTSL 5 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 MYL4-208ENST00000572316 850 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 AP000897.2-202ENST00000579332 821 ntTSL 3 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 TMEM147-AS1-204ENST00000590125 698 ntTSL 3 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 LINC01206-212ENST00000609168 988 ntTSL 5 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 AC011591.2-201ENST00000636637 786 ntBASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 FAM238C-201ENST00000638416 868 ntTSL 2 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 RGPD4-AS1-202ENST00000457647 1792 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC20.36■□□□□ 0.85
RIMBP3Q9UFD9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 SPP1-203ENST00000395080 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 KRTAP4-11-201ENST00000391413 1180 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 AP000692.1-201ENST00000397184 596 ntTSL 5 BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 AC004951.2-201ENST00000420754 789 ntBASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 FRG2B-201ENST00000425520 890 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 AC078962.1-201ENST00000444853 281 ntTSL 5 BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 RN7SL26P-201ENST00000460792 307 ntBASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 MRPL2-203ENST00000468957 689 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 YAP1P1-201ENST00000401504 1393 ntBASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms