Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 AC012645.4-201ENST00000610691 1061 ntBASIC13.43□□□□□ -0.26
RNF217Q8TC41 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF217Q8TC41 AC132938.4-201ENST00000623835 848 ntBASIC13.43□□□□□ -0.26
RNF217Q8TC41 AC002472.3-201ENST00000640124 621 ntBASIC13.43□□□□□ -0.26
RNF217Q8TC41 AL591163.1-201ENST00000641757 987 ntBASIC13.43□□□□□ -0.26
RNF217Q8TC41 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RNF217Q8TC41 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF217Q8TC41 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF217Q8TC41 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF217Q8TC41 ZMAT4-202ENST00000315769 2250 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF217Q8TC41 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF217Q8TC41 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF217Q8TC41 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
RNF217Q8TC41 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF217Q8TC41 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF217Q8TC41 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF217Q8TC41 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC13.43□□□□□ -0.26
RNF217Q8TC41 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
RNF217Q8TC41 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF217Q8TC41 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF217Q8TC41 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF217Q8TC41 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 PPP3CB-203ENST00000394828 3119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 PPP3CB-204ENST00000394829 3149 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 RBFOX1-224ENST00000641259 3651 ntBASIC13.42□□□□□ -0.26
RNF217Q8TC41 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 AC005229.1-201ENST00000392885 409 ntBASIC13.42□□□□□ -0.26
RNF217Q8TC41 RN7SKP175-201ENST00000408472 289 ntBASIC13.42□□□□□ -0.26
RNF217Q8TC41 AL355994.1-201ENST00000424379 260 ntBASIC13.42□□□□□ -0.26
RNF217Q8TC41 FAM197Y7-201ENST00000432892 766 ntBASIC13.42□□□□□ -0.26
RNF217Q8TC41 AC016694.1-201ENST00000434179 700 ntBASIC13.42□□□□□ -0.26
RNF217Q8TC41 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 FTH1P14-201ENST00000482930 551 ntBASIC13.42□□□□□ -0.26
RNF217Q8TC41 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 AC005225.4-201ENST00000557330 545 ntBASIC13.42□□□□□ -0.26
RNF217Q8TC41 AC106820.3-201ENST00000561653 397 ntBASIC13.42□□□□□ -0.26
RNF217Q8TC41 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 RPSAP52-203ENST00000622976 1023 ntBASIC13.42□□□□□ -0.26
RNF217Q8TC41 AC138951.2-201ENST00000623455 1161 ntBASIC13.42□□□□□ -0.26
RNF217Q8TC41 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 ANKRD20A7P-201ENST00000402318 2414 ntBASIC13.42□□□□□ -0.26
RNF217Q8TC41 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RNF217Q8TC41 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF217Q8TC41 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF217Q8TC41 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.41□□□□□ -0.26
RNF217Q8TC41 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF217Q8TC41 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF217Q8TC41 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
RNF217Q8TC41 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF217Q8TC41 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF217Q8TC41 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RNF217Q8TC41 TCAM1P-207ENST00000485295 1537 ntBASIC13.41□□□□□ -0.26
RNF217Q8TC41 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RNF217Q8TC41 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF217Q8TC41 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF217Q8TC41 AL512384.1-201ENST00000406683 331 ntBASIC13.41□□□□□ -0.26
RNF217Q8TC41 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.41□□□□□ -0.26
RNF217Q8TC41 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
RNF217Q8TC41 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.41□□□□□ -0.26
RNF217Q8TC41 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.41□□□□□ -0.26
RNF217Q8TC41 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms