Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 RPL17P45-201ENST00000586289 509 ntBASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 AP000322.3-201ENST00000608665 388 ntBASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 AC007250.1-201ENST00000608934 338 ntBASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 AC073352.2-201ENST00000609385 439 ntBASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 COX6A1P2-201ENST00000620597 330 ntBASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 AC005618.3-201ENST00000624928 458 ntBASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 DMBT1P1-203ENST00000636837 4628 ntBASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD3Q7Z3D4 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LYSMD3Q7Z3D4 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.83□□□□□ -0.19
LYSMD3Q7Z3D4 MIR497HG-202ENST00000572453 3838 ntBASIC13.83□□□□□ -0.19
LYSMD3Q7Z3D4 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 AL445250.1-201ENST00000641671 2259 ntBASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 RNVU1-8-201ENST00000364272 125 ntBASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 RN7SL181P-201ENST00000462921 277 ntBASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 AP002803.1-201ENST00000528836 498 ntBASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 AC007952.4-201ENST00000573866 637 ntBASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 AC092171.5-201ENST00000608012 942 ntBASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD3Q7Z3D4 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms