Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 AC090643.2-201ENST00000623442 2029 ntBASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 Z97985.1-201ENST00000332270 946 ntBASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 GH1-203ENST00000351388 685 ntTSL 2 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 HDGF-202ENST00000368206 960 ntTSL 5 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 AC103563.1-201ENST00000429316 123 ntBASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 AC092810.2-201ENST00000431570 362 ntBASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 RHOQP2-201ENST00000449922 579 ntBASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 ALG1L15P-201ENST00000482834 794 ntBASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 AC006518.1-201ENST00000541449 943 ntBASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 AC016582.2-202ENST00000587765 1094 ntBASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 MIR6074-201ENST00000612054 107 ntBASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 BX322534.1-201ENST00000635574 241 ntBASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 AC215524.1-201ENST00000635696 241 ntBASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CTC1Q2NKJ3 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 HLF-202ENST00000430986 1385 ntTSL 2 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 AGAP10P-201ENST00000454844 2418 ntBASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 RPL14-203ENST00000416518 812 ntTSL 3 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 EEF1DP2-201ENST00000433698 843 ntBASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 RNU1-80P-201ENST00000459500 161 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms