Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAE1P78406 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
RAE1P78406 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAE1P78406 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
RAE1P78406 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.96□□□□□ -0.33
RAE1P78406 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAE1P78406 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAE1P78406 AC025186.1-201ENST00000478174 870 ntBASIC12.96□□□□□ -0.33
RAE1P78406 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.96□□□□□ -0.33
RAE1P78406 RN7SL767P-201ENST00000493013 295 ntBASIC12.96□□□□□ -0.33
RAE1P78406 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.96□□□□□ -0.33
RAE1P78406 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.96□□□□□ -0.33
RAE1P78406 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.96□□□□□ -0.33
RAE1P78406 AC245884.6-201ENST00000515672 1067 ntBASIC12.96□□□□□ -0.33
RAE1P78406 IGLV3-15-201ENST00000518356 244 ntBASIC12.96□□□□□ -0.33
RAE1P78406 OR5BD1P-201ENST00000532527 817 ntBASIC12.96□□□□□ -0.33
RAE1P78406 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.96□□□□□ -0.33
RAE1P78406 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAE1P78406 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.96□□□□□ -0.33
RAE1P78406 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.96□□□□□ -0.33
RAE1P78406 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.96□□□□□ -0.33
RAE1P78406 AL359091.4-201ENST00000610052 409 ntBASIC12.96□□□□□ -0.33
RAE1P78406 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAE1P78406 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC12.96□□□□□ -0.33
RAE1P78406 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAE1P78406 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAE1P78406 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC12.96□□□□□ -0.34
RAE1P78406 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RAE1P78406 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAE1P78406 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RAE1P78406 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.96□□□□□ -0.34
RAE1P78406 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAE1P78406 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.96□□□□□ -0.34
RAE1P78406 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.96□□□□□ -0.34
RAE1P78406 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAE1P78406 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
RAE1P78406 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAE1P78406 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 AL450468.2-201ENST00000565955 1889 ntBASIC12.95□□□□□ -0.34
RAE1P78406 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RAE1P78406 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC12.95□□□□□ -0.34
RAE1P78406 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.95□□□□□ -0.34
RAE1P78406 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.95□□□□□ -0.34
RAE1P78406 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.95□□□□□ -0.34
RAE1P78406 SSR4P1-201ENST00000415143 412 ntBASIC12.95□□□□□ -0.34
RAE1P78406 AL592076.1-201ENST00000424448 303 ntBASIC12.95□□□□□ -0.34
RAE1P78406 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.95□□□□□ -0.34
RAE1P78406 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.95□□□□□ -0.34
RAE1P78406 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.95□□□□□ -0.34
RAE1P78406 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.95□□□□□ -0.34
RAE1P78406 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.95□□□□□ -0.34
RAE1P78406 RN7SKP155-201ENST00000516031 288 ntBASIC12.95□□□□□ -0.34
RAE1P78406 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.95□□□□□ -0.34
RAE1P78406 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.95□□□□□ -0.34
RAE1P78406 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.95□□□□□ -0.34
RAE1P78406 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.95□□□□□ -0.34
RAE1P78406 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RAE1P78406 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.95□□□□□ -0.34
RAE1P78406 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC12.95□□□□□ -0.34
RAE1P78406 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
RAE1P78406 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 AL022323.5-201ENST00000624101 2059 ntBASIC12.95□□□□□ -0.34
RAE1P78406 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAE1P78406 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.94□□□□□ -0.34
RAE1P78406 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RAE1P78406 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
RAE1P78406 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
RAE1P78406 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.94□□□□□ -0.34
RAE1P78406 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RAE1P78406 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RAE1P78406 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
RAE1P78406 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.94□□□□□ -0.34
RAE1P78406 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC12.94□□□□□ -0.34
RAE1P78406 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms