Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SUMO3P55854 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SUMO3P55854 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SUMO3P55854 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SUMO3P55854 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SUMO3P55854 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SUMO3P55854 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SUMO3P55854 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.38□□□□□ -0.43
SUMO3P55854 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 AC026271.4-201ENST00000578214 1833 ntBASIC12.37□□□□□ -0.43
SUMO3P55854 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.37□□□□□ -0.43
SUMO3P55854 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
SUMO3P55854 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.37□□□□□ -0.43
SUMO3P55854 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC12.37□□□□□ -0.43
SUMO3P55854 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
SUMO3P55854 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC12.37□□□□□ -0.43
SUMO3P55854 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.37□□□□□ -0.43
SUMO3P55854 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 PIGCP1-201ENST00000527583 895 ntBASIC12.37□□□□□ -0.43
SUMO3P55854 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 AC226150.1-201ENST00000544259 466 ntBASIC12.37□□□□□ -0.43
SUMO3P55854 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 DLK1-205ENST00000556051 469 ntTSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.37□□□□□ -0.43
SUMO3P55854 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC12.37□□□□□ -0.43
SUMO3P55854 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SUMO3P55854 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.37□□□□□ -0.43
SUMO3P55854 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.37□□□□□ -0.43
SUMO3P55854 AC073352.2-201ENST00000609385 439 ntBASIC12.37□□□□□ -0.43
SUMO3P55854 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 AC005154.3-201ENST00000419639 1393 ntBASIC12.37□□□□□ -0.43
SUMO3P55854 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.37□□□□□ -0.43
SUMO3P55854 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
SUMO3P55854 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 POM121L4P-202ENST00000427789 1891 ntBASIC12.37□□□□□ -0.43
SUMO3P55854 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.37□□□□□ -0.43
SUMO3P55854 PPT1-213ENST00000641319 2388 ntBASIC12.37□□□□□ -0.43
SUMO3P55854 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
SUMO3P55854 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
SUMO3P55854 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SUMO3P55854 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SUMO3P55854 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 AC114271.1-201ENST00000612689 2813 ntBASIC12.37□□□□□ -0.43
SUMO3P55854 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SUMO3P55854 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SUMO3P55854 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SUMO3P55854 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.37□□□□□ -0.43
SUMO3P55854 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
SUMO3P55854 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.36□□□□□ -0.43
SUMO3P55854 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SUMO3P55854 AC012531.1-201ENST00000562848 2680 ntBASIC12.36□□□□□ -0.43
SUMO3P55854 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.36□□□□□ -0.43
SUMO3P55854 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SUMO3P55854 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC12.36□□□□□ -0.43
SUMO3P55854 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms