Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.73□□□□□ -0.05
SSR1P43307 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
SSR1P43307 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.73□□□□□ -0.05
SSR1P43307 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.73□□□□□ -0.05
SSR1P43307 DUX4L50-201ENST00000455245 715 ntBASIC14.73□□□□□ -0.05
SSR1P43307 PFN1P12-201ENST00000455938 534 ntBASIC14.73□□□□□ -0.05
SSR1P43307 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.73□□□□□ -0.05
SSR1P43307 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.73□□□□□ -0.05
SSR1P43307 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.73□□□□□ -0.05
SSR1P43307 MIR3188-201ENST00000583494 85 ntBASIC14.73□□□□□ -0.05
SSR1P43307 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
SSR1P43307 AL118558.3-201ENST00000607414 1079 ntBASIC14.73□□□□□ -0.05
SSR1P43307 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.73□□□□□ -0.05
SSR1P43307 AL008638.5-201ENST00000623814 1298 ntBASIC14.73□□□□□ -0.05
SSR1P43307 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SSR1P43307 NAP1L6-202ENST00000641404 1222 ntBASIC14.73□□□□□ -0.05
SSR1P43307 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
SSR1P43307 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.73□□□□□ -0.05
SSR1P43307 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SSR1P43307 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SSR1P43307 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.73□□□□□ -0.05
SSR1P43307 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.73□□□□□ -0.05
SSR1P43307 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 FAM95B1-212ENST00000592873 4692 ntBASIC14.72□□□□□ -0.05
SSR1P43307 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.72□□□□□ -0.05
SSR1P43307 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SSR1P43307 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SSR1P43307 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SSR1P43307 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.72□□□□□ -0.05
SSR1P43307 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.72□□□□□ -0.05
SSR1P43307 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SSR1P43307 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
SSR1P43307 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.72□□□□□ -0.05
SSR1P43307 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 AC006987.1-201ENST00000413610 527 ntBASIC14.72□□□□□ -0.05
SSR1P43307 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.72□□□□□ -0.05
SSR1P43307 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.72□□□□□ -0.05
SSR1P43307 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.72□□□□□ -0.05
SSR1P43307 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.72□□□□□ -0.05
SSR1P43307 RPS2P32-201ENST00000439199 892 ntBASIC14.72□□□□□ -0.05
SSR1P43307 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.72□□□□□ -0.05
SSR1P43307 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.72□□□□□ -0.05
SSR1P43307 MARK2P5-201ENST00000507649 634 ntBASIC14.72□□□□□ -0.05
SSR1P43307 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.72□□□□□ -0.05
SSR1P43307 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.72□□□□□ -0.05
SSR1P43307 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC14.72□□□□□ -0.05
SSR1P43307 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.72□□□□□ -0.05
SSR1P43307 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SSR1P43307 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SSR1P43307 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.72□□□□□ -0.05
SSR1P43307 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC14.72□□□□□ -0.05
SSR1P43307 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SSR1P43307 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSR1P43307 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.71□□□□□ -0.05
SSR1P43307 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SSR1P43307 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.71□□□□□ -0.05
SSR1P43307 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms