Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.43□□□□□ -0.1
BDNFP23560 BCAS2P2-201ENST00000425064 674 ntBASIC14.43□□□□□ -0.1
BDNFP23560 AQP7P5-201ENST00000428759 1049 ntBASIC14.43□□□□□ -0.1
BDNFP23560 AC103563.1-201ENST00000429316 123 ntBASIC14.43□□□□□ -0.1
BDNFP23560 AQP7P4-201ENST00000447083 1042 ntBASIC14.43□□□□□ -0.1
BDNFP23560 AQP7P2-201ENST00000453967 1041 ntBASIC14.43□□□□□ -0.1
BDNFP23560 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.43□□□□□ -0.1
BDNFP23560 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.43□□□□□ -0.1
BDNFP23560 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.43□□□□□ -0.1
BDNFP23560 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.43□□□□□ -0.1
BDNFP23560 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.43□□□□□ -0.1
BDNFP23560 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.43□□□□□ -0.1
BDNFP23560 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
BDNFP23560 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC14.43□□□□□ -0.1
BDNFP23560 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC14.43□□□□□ -0.1
BDNFP23560 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
BDNFP23560 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
BDNFP23560 CSTP2-201ENST00000610599 398 ntBASIC14.43□□□□□ -0.1
BDNFP23560 AC126755.5-201ENST00000622756 267 ntBASIC14.43□□□□□ -0.1
BDNFP23560 AQP7P3-201ENST00000624547 1041 ntBASIC14.43□□□□□ -0.1
BDNFP23560 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
BDNFP23560 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BDNFP23560 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.43□□□□□ -0.1
BDNFP23560 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.43□□□□□ -0.1
BDNFP23560 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.43□□□□□ -0.1
BDNFP23560 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
BDNFP23560 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
BDNFP23560 AC024075.2-201ENST00000598112 1473 ntBASIC14.43□□□□□ -0.1
BDNFP23560 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BDNFP23560 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
BDNFP23560 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
BDNFP23560 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
BDNFP23560 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BDNFP23560 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BDNFP23560 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BDNFP23560 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC14.43□□□□□ -0.1
BDNFP23560 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BDNFP23560 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BDNFP23560 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 AC118758.2-201ENST00000614242 2813 ntBASIC14.42□□□□□ -0.1
BDNFP23560 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.42□□□□□ -0.1
BDNFP23560 AC107918.4-201ENST00000641966 3141 ntBASIC14.42□□□□□ -0.1
BDNFP23560 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
BDNFP23560 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
BDNFP23560 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 U3.5-201ENST00000363448 216 ntBASIC14.42□□□□□ -0.1
BDNFP23560 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC14.42□□□□□ -0.1
BDNFP23560 RN7SL494P-201ENST00000461517 304 ntBASIC14.42□□□□□ -0.1
BDNFP23560 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14.42□□□□□ -0.1
BDNFP23560 AL157792.1-201ENST00000488281 530 ntBASIC14.42□□□□□ -0.1
BDNFP23560 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.42□□□□□ -0.1
BDNFP23560 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC14.42□□□□□ -0.1
BDNFP23560 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.42□□□□□ -0.1
BDNFP23560 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.42□□□□□ -0.1
BDNFP23560 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC14.42□□□□□ -0.1
BDNFP23560 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 MIR6746-201ENST00000620971 63 ntBASIC14.42□□□□□ -0.1
BDNFP23560 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
BDNFP23560 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
BDNFP23560 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 AL358781.1-202ENST00000321081 1360 ntBASIC14.42□□□□□ -0.1
BDNFP23560 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 AL672207.1-201ENST00000328462 1570 ntBASIC14.42□□□□□ -0.1
BDNFP23560 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 EGLN3-205ENST00000547327 2849 ntBASIC14.42□□□□□ -0.1
BDNFP23560 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BDNFP23560 AL513497.1-201ENST00000624273 2083 ntBASIC14.42□□□□□ -0.1
BDNFP23560 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
BDNFP23560 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
BDNFP23560 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BDNFP23560 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BDNFP23560 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BDNFP23560 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BDNFP23560 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms