Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
POLR3DP05423 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
POLR3DP05423 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
POLR3DP05423 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR3DP05423 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC16.39■□□□□ 0.21
POLR3DP05423 AL445209.1-201ENST00000607269 3491 ntBASIC16.39■□□□□ 0.21
POLR3DP05423 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
POLR3DP05423 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC16.39■□□□□ 0.21
POLR3DP05423 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR3DP05423 HADH-202ENST00000403312 1752 ntTSL 5 BASIC16.39■□□□□ 0.21
POLR3DP05423 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC16.39■□□□□ 0.21
POLR3DP05423 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
POLR3DP05423 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR3DP05423 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC16.39■□□□□ 0.21
POLR3DP05423 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
POLR3DP05423 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
POLR3DP05423 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
POLR3DP05423 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR3DP05423 LINP1-201ENST00000417112 917 ntTSL 2 BASIC16.39■□□□□ 0.21
POLR3DP05423 GULOP-201ENST00000454030 748 ntBASIC16.39■□□□□ 0.21
POLR3DP05423 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
POLR3DP05423 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.39■□□□□ 0.21
POLR3DP05423 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.39■□□□□ 0.21
POLR3DP05423 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC16.39■□□□□ 0.21
POLR3DP05423 CD44-224ENST00000526669 870 ntTSL 5 BASIC16.39■□□□□ 0.21
POLR3DP05423 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.39■□□□□ 0.21
POLR3DP05423 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC16.39■□□□□ 0.21
POLR3DP05423 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.39■□□□□ 0.21
POLR3DP05423 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
POLR3DP05423 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC16.39■□□□□ 0.21
POLR3DP05423 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR3DP05423 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
POLR3DP05423 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
POLR3DP05423 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
POLR3DP05423 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
POLR3DP05423 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
POLR3DP05423 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
POLR3DP05423 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR3DP05423 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC16.39■□□□□ 0.21
POLR3DP05423 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
POLR3DP05423 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR3DP05423 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
POLR3DP05423 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC16.39■□□□□ 0.21
POLR3DP05423 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR3DP05423 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC16.39■□□□□ 0.21
POLR3DP05423 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR3DP05423 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.38■□□□□ 0.21
POLR3DP05423 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.38■□□□□ 0.21
POLR3DP05423 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 AC020658.7-201ENST00000624274 2442 ntBASIC16.38■□□□□ 0.21
POLR3DP05423 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.38■□□□□ 0.21
POLR3DP05423 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
POLR3DP05423 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.38■□□□□ 0.21
POLR3DP05423 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.38■□□□□ 0.21
POLR3DP05423 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.38■□□□□ 0.21
POLR3DP05423 AC090136.2-201ENST00000517809 420 ntBASIC16.38■□□□□ 0.21
POLR3DP05423 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 BAK1P2-201ENST00000532665 631 ntBASIC16.38■□□□□ 0.21
POLR3DP05423 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 GOLGA2P7-209ENST00000560408 745 ntBASIC16.38■□□□□ 0.21
POLR3DP05423 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC16.38■□□□□ 0.21
POLR3DP05423 MIR3940-201ENST00000579148 102 ntBASIC16.38■□□□□ 0.21
POLR3DP05423 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.38■□□□□ 0.21
POLR3DP05423 AC008972.2-201ENST00000606587 494 ntBASIC16.38■□□□□ 0.21
POLR3DP05423 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC16.38■□□□□ 0.21
POLR3DP05423 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
POLR3DP05423 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC16.38■□□□□ 0.21
POLR3DP05423 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.38■□□□□ 0.21
POLR3DP05423 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 DMBT1P1-203ENST00000636837 4628 ntBASIC16.38■□□□□ 0.21
POLR3DP05423 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.38■□□□□ 0.21
POLR3DP05423 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR3DP05423 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
POLR3DP05423 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
POLR3DP05423 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
POLR3DP05423 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
POLR3DP05423 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms