Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC10.49□□□□□ -0.73
VGLL1Q99990 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC10.49□□□□□ -0.73
VGLL1Q99990 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC10.49□□□□□ -0.73
VGLL1Q99990 AC107375.1-201ENST00000564464 2231 ntBASIC10.49□□□□□ -0.73
VGLL1Q99990 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC10.49□□□□□ -0.73
VGLL1Q99990 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 AL021155.1-201ENST00000438808 2637 ntBASIC10.49□□□□□ -0.73
VGLL1Q99990 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC10.49□□□□□ -0.73
VGLL1Q99990 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC10.49□□□□□ -0.73
VGLL1Q99990 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 AC027369.3-201ENST00000530465 3707 ntBASIC10.49□□□□□ -0.73
VGLL1Q99990 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
VGLL1Q99990 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
VGLL1Q99990 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC10.49□□□□□ -0.73
VGLL1Q99990 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
VGLL1Q99990 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC10.49□□□□□ -0.73
VGLL1Q99990 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC10.49□□□□□ -0.73
VGLL1Q99990 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
VGLL1Q99990 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC10.49□□□□□ -0.73
VGLL1Q99990 HLA-V-201ENST00000429037 534 ntBASIC10.49□□□□□ -0.73
VGLL1Q99990 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC10.49□□□□□ -0.73
VGLL1Q99990 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC10.49□□□□□ -0.73
VGLL1Q99990 AC011742.3-201ENST00000439053 820 ntBASIC10.49□□□□□ -0.73
VGLL1Q99990 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC10.49□□□□□ -0.73
VGLL1Q99990 TUBB8P8-201ENST00000458717 1058 ntBASIC10.49□□□□□ -0.73
VGLL1Q99990 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC10.49□□□□□ -0.73
VGLL1Q99990 ACR-203ENST00000529621 708 ntTSL 5 BASIC10.49□□□□□ -0.73
VGLL1Q99990 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 AC005730.2-201ENST00000564549 1184 ntBASIC10.49□□□□□ -0.73
VGLL1Q99990 EEF1DP1-201ENST00000585891 896 ntBASIC10.49□□□□□ -0.73
VGLL1Q99990 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC10.49□□□□□ -0.73
VGLL1Q99990 RPS24-214ENST00000613865 538 ntTSL 5 BASIC10.49□□□□□ -0.73
VGLL1Q99990 AC015967.2-201ENST00000624092 234 ntBASIC10.49□□□□□ -0.73
VGLL1Q99990 AC006435.4-201ENST00000625037 234 ntBASIC10.49□□□□□ -0.73
VGLL1Q99990 AL356737.1-201ENST00000634391 234 ntBASIC10.49□□□□□ -0.73
VGLL1Q99990 AL139424.3-202ENST00000641619 917 ntBASIC10.49□□□□□ -0.73
VGLL1Q99990 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC10.49□□□□□ -0.73
VGLL1Q99990 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
VGLL1Q99990 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
VGLL1Q99990 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC10.49□□□□□ -0.73
VGLL1Q99990 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC10.49□□□□□ -0.73
VGLL1Q99990 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC10.49□□□□□ -0.73
VGLL1Q99990 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC10.48□□□□□ -0.73
VGLL1Q99990 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC10.48□□□□□ -0.73
VGLL1Q99990 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC10.48□□□□□ -0.73
VGLL1Q99990 AC022497.1-201ENST00000624916 3691 ntBASIC10.48□□□□□ -0.73
VGLL1Q99990 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
VGLL1Q99990 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 AC022364.1-202ENST00000617468 2409 ntBASIC10.48□□□□□ -0.73
VGLL1Q99990 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
VGLL1Q99990 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC10.48□□□□□ -0.73
VGLL1Q99990 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
VGLL1Q99990 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
VGLL1Q99990 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC10.48□□□□□ -0.73
VGLL1Q99990 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC10.48□□□□□ -0.73
VGLL1Q99990 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC10.48□□□□□ -0.73
VGLL1Q99990 HNRNPA1P2-207ENST00000432375 960 ntBASIC10.48□□□□□ -0.73
VGLL1Q99990 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 GAPDHP21-201ENST00000450301 1010 ntBASIC10.48□□□□□ -0.73
VGLL1Q99990 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC10.48□□□□□ -0.73
VGLL1Q99990 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC10.48□□□□□ -0.73
VGLL1Q99990 RN7SL277P-201ENST00000481521 288 ntBASIC10.48□□□□□ -0.73
VGLL1Q99990 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC10.48□□□□□ -0.73
VGLL1Q99990 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC10.48□□□□□ -0.73
VGLL1Q99990 CMC2-204ENST00000562713 573 ntTSL 3 BASIC10.48□□□□□ -0.73
VGLL1Q99990 CMC2-209ENST00000565108 399 ntTSL 2 BASIC10.48□□□□□ -0.73
VGLL1Q99990 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC10.48□□□□□ -0.73
VGLL1Q99990 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms