Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 RNA5SP248-201ENST00000365602 127 ntBASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 FTH1P19-201ENST00000402402 528 ntBASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 AC138392.1-201ENST00000427577 921 ntBASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 AC106748.1-201ENST00000454801 384 ntBASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 CDK2AP2P2-201ENST00000478512 367 ntBASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 ALDH3B2-204ENST00000530069 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 AC120498.5-201ENST00000561757 299 ntBASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 AL450468.2-201ENST00000565955 1889 ntBASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 CYP2F2P-201ENST00000437853 1056 ntBASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 AL391822.1-201ENST00000452580 562 ntBASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 MIR5193-201ENST00000584510 109 ntBASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 AC104440.1-201ENST00000605010 343 ntBASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42BPAQ5VT25 LIPC-202ENST00000356113 2161 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 CITED1-206ENST00000431381 941 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 CITED1-207ENST00000445983 820 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 AKR1B1P3-201ENST00000525311 588 ntBASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 AC103810.4-201ENST00000578601 257 ntBASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 AC116036.2-201ENST00000607592 462 ntBASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 EML1-203ENST00000334192 4064 ntTSL 5 BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.84■□□□□ 0.77
CDC42BPAQ5VT25 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 AIFM1P1-201ENST00000413342 1841 ntBASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 C1orf158-201ENST00000376210 695 ntTSL 3 BASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 RN7SL460P-201ENST00000582806 258 ntBASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 AC087893.1-201ENST00000612818 664 ntBASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 PAX6-247ENST00000638965 979 ntTSL 5 BASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC19.83■□□□□ 0.77
CDC42BPAQ5VT25 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDC42BPAQ5VT25 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC19.83■□□□□ 0.76
CDC42BPAQ5VT25 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDC42BPAQ5VT25 ABR-228ENST00000574437 3196 ntTSL 5 BASIC19.83■□□□□ 0.76
CDC42BPAQ5VT25 GJB1-202ENST00000374022 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDC42BPAQ5VT25 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDC42BPAQ5VT25 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CDC42BPAQ5VT25 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms