Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP7AQ04656 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
ATP7AQ04656 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 AC073585.1-201ENST00000368895 1328 ntBASIC19.53■□□□□ 0.72
ATP7AQ04656 SULT1A3-202ENST00000395138 1326 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP7AQ04656 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP7AQ04656 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ATP7AQ04656 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP7AQ04656 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP7AQ04656 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP7AQ04656 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP7AQ04656 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP7AQ04656 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP7AQ04656 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP7AQ04656 CRYBB2-201ENST00000398215 886 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP7AQ04656 SLC25A6P1-201ENST00000412123 775 ntBASIC19.52■□□□□ 0.72
ATP7AQ04656 GGT8P-201ENST00000418938 532 ntBASIC19.52■□□□□ 0.72
ATP7AQ04656 HNRNPA1P59-201ENST00000430583 918 ntBASIC19.52■□□□□ 0.72
ATP7AQ04656 ATP5G1P7-201ENST00000444398 400 ntBASIC19.52■□□□□ 0.72
ATP7AQ04656 P2RX6P-202ENST00000450626 357 ntBASIC19.52■□□□□ 0.72
ATP7AQ04656 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP7AQ04656 RN7SL750P-201ENST00000582814 238 ntBASIC19.52■□□□□ 0.72
ATP7AQ04656 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ATP7AQ04656 AL022323.5-201ENST00000624101 2059 ntBASIC19.52■□□□□ 0.72
ATP7AQ04656 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ATP7AQ04656 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP7AQ04656 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP7AQ04656 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
ATP7AQ04656 AC025538.1-201ENST00000510707 1486 ntBASIC19.52■□□□□ 0.72
ATP7AQ04656 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
ATP7AQ04656 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ATP7AQ04656 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ATP7AQ04656 AC099689.1-201ENST00000624383 1302 ntBASIC19.52■□□□□ 0.71
ATP7AQ04656 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC19.52■□□□□ 0.71
ATP7AQ04656 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
ATP7AQ04656 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP7AQ04656 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ATP7AQ04656 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC19.52■□□□□ 0.71
ATP7AQ04656 MIPEPP1-201ENST00000413533 2027 ntBASIC19.51■□□□□ 0.71
ATP7AQ04656 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP7AQ04656 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP7AQ04656 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP7AQ04656 RPL19P20-201ENST00000415648 591 ntBASIC19.51■□□□□ 0.71
ATP7AQ04656 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC19.51■□□□□ 0.71
ATP7AQ04656 HLA-DQB3-203ENST00000425319 356 ntBASIC19.51■□□□□ 0.71
ATP7AQ04656 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ATP7AQ04656 RN7SL483P-201ENST00000478417 285 ntBASIC19.51■□□□□ 0.71
ATP7AQ04656 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP7AQ04656 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP7AQ04656 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC19.51■□□□□ 0.71
ATP7AQ04656 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC19.51■□□□□ 0.71
ATP7AQ04656 AD000091.1-201ENST00000592379 287 ntBASIC19.51■□□□□ 0.71
ATP7AQ04656 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP7AQ04656 AC072061.1-201ENST00000569710 2234 ntBASIC19.51■□□□□ 0.71
ATP7AQ04656 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP7AQ04656 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP7AQ04656 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP7AQ04656 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ATP7AQ04656 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP7AQ04656 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ATP7AQ04656 RBM22P2-201ENST00000393978 1814 ntBASIC19.51■□□□□ 0.71
ATP7AQ04656 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
ATP7AQ04656 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ATP7AQ04656 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP7AQ04656 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP7AQ04656 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ATP7AQ04656 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP7AQ04656 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP7AQ04656 FAM90A27P-201ENST00000593323 1370 ntBASIC19.51■□□□□ 0.71
ATP7AQ04656 FAM90A28P-202ENST00000597191 1374 ntBASIC19.51■□□□□ 0.71
ATP7AQ04656 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP7AQ04656 TSPEAR-AS2-201ENST00000330490 823 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP7AQ04656 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP7AQ04656 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC19.51■□□□□ 0.71
ATP7AQ04656 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC19.51■□□□□ 0.71
ATP7AQ04656 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP7AQ04656 RN7SL111P-201ENST00000468841 285 ntBASIC19.51■□□□□ 0.71
ATP7AQ04656 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC19.51■□□□□ 0.71
ATP7AQ04656 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC19.51■□□□□ 0.71
ATP7AQ04656 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP7AQ04656 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC19.51■□□□□ 0.71
ATP7AQ04656 KRT16P4-202ENST00000580052 362 ntTSL 3 BASIC19.51■□□□□ 0.71
ATP7AQ04656 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP7AQ04656 AC087893.1-201ENST00000612818 664 ntBASIC19.51■□□□□ 0.71
ATP7AQ04656 RBP1-206ENST00000617459 667 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP7AQ04656 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP7AQ04656 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ATP7AQ04656 AC015656.1-201ENST00000624209 3578 ntBASIC19.5■□□□□ 0.71
ATP7AQ04656 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP7AQ04656 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
ATP7AQ04656 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP7AQ04656 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms