Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC16.68■□□□□ 0.26
PDE6BP35913 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC16.68■□□□□ 0.26
PDE6BP35913 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
PDE6BP35913 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 TCAM1P-207ENST00000485295 1537 ntBASIC16.68■□□□□ 0.26
PDE6BP35913 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
PDE6BP35913 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC16.68■□□□□ 0.26
PDE6BP35913 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PDE6BP35913 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.68■□□□□ 0.26
PDE6BP35913 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PDE6BP35913 AC015656.1-201ENST00000624209 3578 ntBASIC16.68■□□□□ 0.26
PDE6BP35913 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PDE6BP35913 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PDE6BP35913 AC140479.7-201ENST00000636301 2332 ntBASIC16.68■□□□□ 0.26
PDE6BP35913 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6BP35913 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC16.68■□□□□ 0.26
PDE6BP35913 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PDE6BP35913 C8orf49-201ENST00000525043 1968 ntBASIC16.68■□□□□ 0.26
PDE6BP35913 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
PDE6BP35913 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6BP35913 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6BP35913 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.67■□□□□ 0.26
PDE6BP35913 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6BP35913 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.67■□□□□ 0.26
PDE6BP35913 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC16.67■□□□□ 0.26
PDE6BP35913 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6BP35913 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6BP35913 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PDE6BP35913 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6BP35913 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PDE6BP35913 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.67■□□□□ 0.26
PDE6BP35913 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PDE6BP35913 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PDE6BP35913 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6BP35913 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
PDE6BP35913 OR7E12P-201ENST00000344740 973 ntBASIC16.67■□□□□ 0.26
PDE6BP35913 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6BP35913 NAA10-205ENST00000393712 908 ntTSL 5 BASIC16.67■□□□□ 0.26
PDE6BP35913 BICD1P1-201ENST00000457832 1222 ntBASIC16.67■□□□□ 0.26
PDE6BP35913 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC16.67■□□□□ 0.26
PDE6BP35913 IGHVII-33-1-201ENST00000524010 280 ntBASIC16.67■□□□□ 0.26
PDE6BP35913 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
PDE6BP35913 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC16.67■□□□□ 0.26
PDE6BP35913 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC16.67■□□□□ 0.26
PDE6BP35913 AC134878.2-201ENST00000620700 1265 ntBASIC16.67■□□□□ 0.26
PDE6BP35913 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC16.67■□□□□ 0.26
PDE6BP35913 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC16.67■□□□□ 0.26
PDE6BP35913 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
PDE6BP35913 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6BP35913 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PDE6BP35913 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6BP35913 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6BP35913 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6BP35913 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6BP35913 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.67■□□□□ 0.26
PDE6BP35913 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6BP35913 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.67■□□□□ 0.26
PDE6BP35913 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6BP35913 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PDE6BP35913 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PDE6BP35913 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6BP35913 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.66■□□□□ 0.26
PDE6BP35913 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6BP35913 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PDE6BP35913 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6BP35913 AC097474.1-201ENST00000506481 1371 ntBASIC16.66■□□□□ 0.26
PDE6BP35913 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC16.66■□□□□ 0.26
PDE6BP35913 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6BP35913 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6BP35913 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PDE6BP35913 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6BP35913 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6BP35913 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC16.66■□□□□ 0.26
PDE6BP35913 RPSAP61-201ENST00000412542 878 ntBASIC16.66■□□□□ 0.26
PDE6BP35913 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PDE6BP35913 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC16.66■□□□□ 0.26
PDE6BP35913 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.66■□□□□ 0.26
PDE6BP35913 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC16.66■□□□□ 0.26
PDE6BP35913 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
PDE6BP35913 HAX1-211ENST00000532105 771 ntTSL 3 BASIC16.66■□□□□ 0.26
PDE6BP35913 TPST2P1-201ENST00000564073 1102 ntBASIC16.66■□□□□ 0.26
PDE6BP35913 AC022001.3-201ENST00000606330 596 ntBASIC16.66■□□□□ 0.26
PDE6BP35913 AC010601.2-201ENST00000623060 774 ntBASIC16.66■□□□□ 0.26
PDE6BP35913 AC090643.2-201ENST00000623442 2029 ntBASIC16.66■□□□□ 0.26
PDE6BP35913 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PDE6BP35913 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PDE6BP35913 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6BP35913 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6BP35913 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6BP35913 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6BP35913 NME1-209ENST00000511355 1645 ntTSL 5 BASIC16.66■□□□□ 0.26
PDE6BP35913 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6BP35913 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.66■□□□□ 0.26
PDE6BP35913 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PDE6BP35913 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6BP35913 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 AC106881.1-201ENST00000605849 3329 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms