Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC12.88□□□□□ -0.35
NR4A1P22736 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.88□□□□□ -0.35
NR4A1P22736 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.88□□□□□ -0.35
NR4A1P22736 AC003958.1-201ENST00000435883 421 ntBASIC12.88□□□□□ -0.35
NR4A1P22736 Z93015.1-201ENST00000451718 390 ntBASIC12.88□□□□□ -0.35
NR4A1P22736 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
NR4A1P22736 RPL13AP20-201ENST00000459725 609 ntBASIC12.88□□□□□ -0.35
NR4A1P22736 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.88□□□□□ -0.35
NR4A1P22736 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.88□□□□□ -0.35
NR4A1P22736 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.88□□□□□ -0.35
NR4A1P22736 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.88□□□□□ -0.35
NR4A1P22736 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
NR4A1P22736 EEF1DP1-201ENST00000585891 896 ntBASIC12.88□□□□□ -0.35
NR4A1P22736 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.88□□□□□ -0.35
NR4A1P22736 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.88□□□□□ -0.35
NR4A1P22736 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
NR4A1P22736 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC12.88□□□□□ -0.35
NR4A1P22736 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.88□□□□□ -0.35
NR4A1P22736 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 REXO1L6P-201ENST00000603433 1515 ntBASIC12.88□□□□□ -0.35
NR4A1P22736 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A1P22736 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.88□□□□□ -0.35
NR4A1P22736 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
NR4A1P22736 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.87□□□□□ -0.35
NR4A1P22736 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 AC020910.5-201ENST00000623668 1865 ntBASIC12.87□□□□□ -0.35
NR4A1P22736 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
NR4A1P22736 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.87□□□□□ -0.35
NR4A1P22736 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.87□□□□□ -0.35
NR4A1P22736 BRWD1P1-201ENST00000401091 371 ntBASIC12.87□□□□□ -0.35
NR4A1P22736 AC079178.1-201ENST00000420915 656 ntBASIC12.87□□□□□ -0.35
NR4A1P22736 CHMP1AP1-201ENST00000445563 662 ntBASIC12.87□□□□□ -0.35
NR4A1P22736 GCOM2-201ENST00000509133 1104 ntBASIC12.87□□□□□ -0.35
NR4A1P22736 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
NR4A1P22736 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.87□□□□□ -0.35
NR4A1P22736 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.87□□□□□ -0.35
NR4A1P22736 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.87□□□□□ -0.35
NR4A1P22736 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.87□□□□□ -0.35
NR4A1P22736 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.87□□□□□ -0.35
NR4A1P22736 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.87□□□□□ -0.35
NR4A1P22736 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.87□□□□□ -0.35
NR4A1P22736 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.87□□□□□ -0.35
NR4A1P22736 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.87□□□□□ -0.35
NR4A1P22736 AP001002.3-201ENST00000623482 206 ntBASIC12.87□□□□□ -0.35
NR4A1P22736 AC099521.2-201ENST00000619354 2036 ntBASIC12.87□□□□□ -0.35
NR4A1P22736 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
NR4A1P22736 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
NR4A1P22736 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.87□□□□□ -0.35
NR4A1P22736 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.87□□□□□ -0.35
NR4A1P22736 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.87□□□□□ -0.35
NR4A1P22736 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
NR4A1P22736 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
NR4A1P22736 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.87□□□□□ -0.35
NR4A1P22736 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC12.87□□□□□ -0.35
NR4A1P22736 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NR4A1P22736 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NR4A1P22736 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NR4A1P22736 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC12.86□□□□□ -0.35
NR4A1P22736 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NR4A1P22736 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
NR4A1P22736 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NR4A1P22736 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NR4A1P22736 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms