Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
KDELR3O43731 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.85□□□□□ -0.19
KDELR3O43731 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.85□□□□□ -0.19
KDELR3O43731 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.85□□□□□ -0.19
KDELR3O43731 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.85□□□□□ -0.19
KDELR3O43731 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
KDELR3O43731 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.85□□□□□ -0.19
KDELR3O43731 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
KDELR3O43731 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
KDELR3O43731 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
KDELR3O43731 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.85□□□□□ -0.19
KDELR3O43731 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC13.85□□□□□ -0.19
KDELR3O43731 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC13.85□□□□□ -0.19
KDELR3O43731 AC136604.1-202ENST00000425471 771 ntBASIC13.85□□□□□ -0.19
KDELR3O43731 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.85□□□□□ -0.19
KDELR3O43731 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.85□□□□□ -0.19
KDELR3O43731 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.85□□□□□ -0.19
KDELR3O43731 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC13.85□□□□□ -0.19
KDELR3O43731 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC13.85□□□□□ -0.19
KDELR3O43731 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC13.85□□□□□ -0.19
KDELR3O43731 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC13.85□□□□□ -0.19
KDELR3O43731 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC13.85□□□□□ -0.19
KDELR3O43731 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC13.85□□□□□ -0.19
KDELR3O43731 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC13.85□□□□□ -0.19
KDELR3O43731 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
KDELR3O43731 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.85□□□□□ -0.19
KDELR3O43731 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC13.85□□□□□ -0.19
KDELR3O43731 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
KDELR3O43731 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
KDELR3O43731 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 MEX3B-202ENST00000558133 4333 ntBASIC13.85□□□□□ -0.19
KDELR3O43731 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
KDELR3O43731 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KDELR3O43731 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.84□□□□□ -0.19
KDELR3O43731 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC13.84□□□□□ -0.19
KDELR3O43731 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
KDELR3O43731 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
KDELR3O43731 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
KDELR3O43731 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
KDELR3O43731 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC13.84□□□□□ -0.19
KDELR3O43731 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
KDELR3O43731 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
KDELR3O43731 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.84□□□□□ -0.19
KDELR3O43731 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.84□□□□□ -0.19
KDELR3O43731 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
KDELR3O43731 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.84□□□□□ -0.19
KDELR3O43731 CFL1P6-201ENST00000400899 494 ntBASIC13.84□□□□□ -0.19
KDELR3O43731 SERF2-204ENST00000402131 586 ntTSL 2 BASIC13.84□□□□□ -0.19
KDELR3O43731 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.84□□□□□ -0.19
KDELR3O43731 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC13.84□□□□□ -0.19
KDELR3O43731 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC13.84□□□□□ -0.19
KDELR3O43731 PIN4P1-201ENST00000451079 396 ntBASIC13.84□□□□□ -0.19
KDELR3O43731 LDHBP1-201ENST00000455730 1119 ntBASIC13.84□□□□□ -0.19
KDELR3O43731 RN7SL351P-201ENST00000469306 248 ntBASIC13.84□□□□□ -0.19
KDELR3O43731 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC13.84□□□□□ -0.19
KDELR3O43731 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC13.84□□□□□ -0.19
KDELR3O43731 AL359219.1-201ENST00000556311 934 ntBASIC13.84□□□□□ -0.19
KDELR3O43731 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.84□□□□□ -0.19
KDELR3O43731 NAMA-206ENST00000605377 509 ntTSL 5 BASIC13.84□□□□□ -0.19
KDELR3O43731 AC010976.2-201ENST00000609697 852 ntBASIC13.84□□□□□ -0.19
KDELR3O43731 AC137723.2-201ENST00000623540 398 ntBASIC13.84□□□□□ -0.19
KDELR3O43731 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.84□□□□□ -0.19
KDELR3O43731 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.84□□□□□ -0.19
KDELR3O43731 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
KDELR3O43731 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 428.9 ms