Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC10.19□□□□□ -0.78
NACAE9PAV3 FGFR3P5-201ENST00000564496 886 ntBASIC10.19□□□□□ -0.78
NACAE9PAV3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC10.19□□□□□ -0.78
NACAE9PAV3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
NACAE9PAV3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NACAE9PAV3 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC10.19□□□□□ -0.78
NACAE9PAV3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC10.19□□□□□ -0.78
NACAE9PAV3 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NACAE9PAV3 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NACAE9PAV3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NACAE9PAV3 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC10.19□□□□□ -0.78
NACAE9PAV3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NACAE9PAV3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NACAE9PAV3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC10.19□□□□□ -0.78
NACAE9PAV3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC10.19□□□□□ -0.78
NACAE9PAV3 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NACAE9PAV3 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
NACAE9PAV3 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC10.19□□□□□ -0.78
NACAE9PAV3 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC10.18□□□□□ -0.78
NACAE9PAV3 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
NACAE9PAV3 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC10.18□□□□□ -0.78
NACAE9PAV3 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC10.18□□□□□ -0.78
NACAE9PAV3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
NACAE9PAV3 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
NACAE9PAV3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC10.18□□□□□ -0.78
NACAE9PAV3 SALL4P6-201ENST00000429385 1691 ntBASIC10.18□□□□□ -0.78
NACAE9PAV3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC10.18□□□□□ -0.78
NACAE9PAV3 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
NACAE9PAV3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 AL662890.1-201ENST00000396818 632 ntBASIC10.18□□□□□ -0.78
NACAE9PAV3 ACTG1P2-201ENST00000415776 1125 ntBASIC10.18□□□□□ -0.78
NACAE9PAV3 ACTG1P11-201ENST00000425411 1125 ntBASIC10.18□□□□□ -0.78
NACAE9PAV3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC10.18□□□□□ -0.78
NACAE9PAV3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC10.18□□□□□ -0.78
NACAE9PAV3 AC140658.4-201ENST00000561990 352 ntBASIC10.18□□□□□ -0.78
NACAE9PAV3 RN7SL774P-201ENST00000577467 290 ntBASIC10.18□□□□□ -0.78
NACAE9PAV3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC10.18□□□□□ -0.78
NACAE9PAV3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC10.18□□□□□ -0.78
NACAE9PAV3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 STRCP1-201ENST00000509801 5328 ntBASIC10.18□□□□□ -0.78
NACAE9PAV3 AL445250.1-201ENST00000641671 2259 ntBASIC10.18□□□□□ -0.78
NACAE9PAV3 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 CNTNAP3B-211ENST00000612828 7455 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 MARK2P9-201ENST00000430958 1727 ntBASIC10.18□□□□□ -0.78
NACAE9PAV3 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC10.18□□□□□ -0.78
NACAE9PAV3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC10.18□□□□□ -0.78
NACAE9PAV3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
NACAE9PAV3 AP002353.1-201ENST00000528257 1599 ntBASIC10.18□□□□□ -0.78
NACAE9PAV3 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC10.18□□□□□ -0.78
NACAE9PAV3 HINT2P1-201ENST00000419438 481 ntBASIC10.18□□□□□ -0.78
NACAE9PAV3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 EEF1DP6-201ENST00000449232 372 ntBASIC10.18□□□□□ -0.78
NACAE9PAV3 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC10.18□□□□□ -0.78
NACAE9PAV3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 HCG18-245ENST00000602550 559 ntTSL 4 BASIC10.18□□□□□ -0.78
NACAE9PAV3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms