Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 RNA5SP420-201ENST00000516997 137 ntBASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 RCC2P5-201ENST00000492126 1487 ntBASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 AC005840.4-201ENST00000541242 2494 ntBASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 MIR611-201ENST00000384869 67 ntBASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 AK2P2-201ENST00000439142 405 ntBASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 TREX1-203ENST00000456089 629 ntTSL 3 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 RN7SL578P-201ENST00000477781 283 ntBASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 GYG1-209ENST00000483267 801 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 PTN-202ENST00000393083 1599 ntTSL 5 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CCDC187A0A096LP49 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC187A0A096LP49 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms