Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 MSNP1-201ENST00000511640 1732 ntBASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 AC136604.1-202ENST00000425471 771 ntBASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 AL135901.1-201ENST00000451812 333 ntBASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 GOLGA2P7-209ENST00000560408 745 ntBASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 AC073592.2-201ENST00000623062 780 ntBASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 AC005252.3-201ENST00000623855 2258 ntBASIC16.65■□□□□ 0.26
HMG20BQ9P0W2 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
HMG20BQ9P0W2 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HMG20BQ9P0W2 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
HMG20BQ9P0W2 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 AC004623.1-201ENST00000624592 2127 ntBASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 TP73-207ENST00000378290 1831 ntTSL 2 BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 KRT18P46-201ENST00000435568 1279 ntBASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 AL157792.1-201ENST00000488281 530 ntBASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 AC026336.4-201ENST00000624565 1050 ntBASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20BQ9P0W2 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC16.63■□□□□ 0.25
HMG20BQ9P0W2 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
HMG20BQ9P0W2 AL445250.1-201ENST00000641671 2259 ntBASIC16.63■□□□□ 0.25
HMG20BQ9P0W2 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20BQ9P0W2 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HMG20BQ9P0W2 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20BQ9P0W2 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms