Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 DMBT1P1-203ENST00000636837 4628 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 BANF1P3-201ENST00000412556 261 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 BCAS2P3-201ENST00000416374 767 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 AL161932.2-201ENST00000435436 679 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 FTLP1-201ENST00000449155 526 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 IMP3P2-201ENST00000489760 475 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 RNA5SP423-201ENST00000517127 109 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 AC134698.3-201ENST00000523880 214 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 RTN3P1-201ENST00000536295 711 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 FGFR3P5-201ENST00000564496 886 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 AC093752.3-201ENST00000567343 901 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 PHBP15-201ENST00000574228 665 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 AC104506.1-201ENST00000609247 429 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 RFC1-217ENST00000639695 867 ntTSL 5 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 AC130448.1-201ENST00000624179 1733 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 OR5AQ1P-202ENST00000641257 1534 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 OR5AQ1P-203ENST00000641818 1529 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USB1Q9BQ65 AC015802.1-201ENST00000588104 1449 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 AL365181.3-201ENST00000605886 3222 ntBASIC12.62□□□□□ -0.39
USB1Q9BQ65 ANP32E-203ENST00000436748 1339 ntTSL 2 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
USB1Q9BQ65 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
USB1Q9BQ65 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 AC006355.1-201ENST00000440982 1012 ntBASIC12.61□□□□□ -0.39
USB1Q9BQ65 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 DUX4L50-201ENST00000455245 715 ntBASIC12.61□□□□□ -0.39
USB1Q9BQ65 LARP7P4-201ENST00000481075 878 ntBASIC12.61□□□□□ -0.39
USB1Q9BQ65 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 KRT8P1-201ENST00000557533 1207 ntBASIC12.61□□□□□ -0.39
USB1Q9BQ65 RN7SL190P-201ENST00000582519 257 ntBASIC12.61□□□□□ -0.39
USB1Q9BQ65 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.61□□□□□ -0.39
USB1Q9BQ65 AC012044.1-201ENST00000603431 297 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms