Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AC092115.1-201ENST00000566277 1402 ntBASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 PTENP1-202ENST00000532280 3996 ntBASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AC215219.1-201ENST00000400706 1817 ntBASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AC133141.1-201ENST00000443015 339 ntBASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AC010900.1-201ENST00000449849 1296 ntBASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AC147876.1-201ENST00000504408 322 ntBASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 BMF-206ENST00000558774 671 ntTSL 3 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AL049840.2-201ENST00000602722 535 ntBASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AC009948.4-201ENST00000604692 675 ntBASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AL357143.1-203ENST00000639750 881 ntBASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTC1Q2NKJ3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 HLA-DMA-202ENST00000395303 1007 ntBASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 AL603841.1-201ENST00000430516 664 ntBASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 MAGEA7P-201ENST00000436482 942 ntBASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 HNRNPA3P6-201ENST00000472163 1006 ntBASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 GOLGA2P8-201ENST00000505201 779 ntBASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 RN7SL371P-201ENST00000578099 267 ntBASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms