Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC079328.1-201ENST00000560358 952 ntBASIC12.41□□□□□ -0.42
SUMO3P55854 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.41□□□□□ -0.42
SUMO3P55854 DNM1P30-201ENST00000563586 452 ntBASIC12.41□□□□□ -0.42
SUMO3P55854 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 AC092171.5-201ENST00000608012 942 ntBASIC12.41□□□□□ -0.42
SUMO3P55854 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.41□□□□□ -0.42
SUMO3P55854 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC12.41□□□□□ -0.42
SUMO3P55854 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC12.41□□□□□ -0.42
SUMO3P55854 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.41□□□□□ -0.42
SUMO3P55854 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
SUMO3P55854 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 HNRNPLP1-201ENST00000421896 1501 ntBASIC12.41□□□□□ -0.42
SUMO3P55854 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.41□□□□□ -0.42
SUMO3P55854 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SUMO3P55854 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SUMO3P55854 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SUMO3P55854 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.4□□□□□ -0.42
SUMO3P55854 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.4□□□□□ -0.42
SUMO3P55854 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC12.4□□□□□ -0.42
SUMO3P55854 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.4□□□□□ -0.42
SUMO3P55854 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SUMO3P55854 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SUMO3P55854 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SUMO3P55854 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SUMO3P55854 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SUMO3P55854 CFL1P6-201ENST00000400899 494 ntBASIC12.4□□□□□ -0.42
SUMO3P55854 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.4□□□□□ -0.42
SUMO3P55854 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SUMO3P55854 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.4□□□□□ -0.42
SUMO3P55854 AC098935.1-201ENST00000446057 611 ntBASIC12.4□□□□□ -0.42
SUMO3P55854 AC079112.1-201ENST00000454972 939 ntBASIC12.4□□□□□ -0.42
SUMO3P55854 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC12.4□□□□□ -0.42
SUMO3P55854 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.4□□□□□ -0.42
SUMO3P55854 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.4□□□□□ -0.42
SUMO3P55854 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.4□□□□□ -0.42
SUMO3P55854 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC12.4□□□□□ -0.42
SUMO3P55854 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 NAA38-204ENST00000575208 529 ntTSL 3 BASIC12.4□□□□□ -0.42
SUMO3P55854 RN7SL556P-201ENST00000582856 298 ntBASIC12.4□□□□□ -0.42
SUMO3P55854 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.4□□□□□ -0.42
SUMO3P55854 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.4□□□□□ -0.42
SUMO3P55854 AC107464.3-201ENST00000609172 737 ntBASIC12.4□□□□□ -0.42
SUMO3P55854 AL591926.3-201ENST00000611630 238 ntBASIC12.4□□□□□ -0.42
SUMO3P55854 AC026120.2-201ENST00000617239 309 ntBASIC12.4□□□□□ -0.42
SUMO3P55854 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.4□□□□□ -0.42
SUMO3P55854 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
SUMO3P55854 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.4□□□□□ -0.42
SUMO3P55854 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.4□□□□□ -0.42
SUMO3P55854 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SUMO3P55854 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SUMO3P55854 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SUMO3P55854 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
SUMO3P55854 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.4□□□□□ -0.42
SUMO3P55854 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.4□□□□□ -0.42
SUMO3P55854 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.4□□□□□ -0.42
SUMO3P55854 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SUMO3P55854 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
SUMO3P55854 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
SUMO3P55854 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SUMO3P55854 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SUMO3P55854 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.39□□□□□ -0.43
SUMO3P55854 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.39□□□□□ -0.43
SUMO3P55854 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SUMO3P55854 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SUMO3P55854 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.39□□□□□ -0.43
SUMO3P55854 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SUMO3P55854 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SUMO3P55854 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms