Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CD37-203ENST00000426897 1204 ntTSL 2 BASIC14.35□□□□□ -0.11
MTHFRP42898 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC14.35□□□□□ -0.11
MTHFRP42898 HNRNPA3P12-201ENST00000437410 1063 ntBASIC14.35□□□□□ -0.11
MTHFRP42898 CCND3P1-201ENST00000438347 580 ntBASIC14.35□□□□□ -0.11
MTHFRP42898 AC026412.1-206ENST00000502273 206 ntBASIC14.35□□□□□ -0.11
MTHFRP42898 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 ACY3-202ENST00000529256 933 ntTSL 3 BASIC14.35□□□□□ -0.11
MTHFRP42898 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC14.35□□□□□ -0.11
MTHFRP42898 AC023051.2-201ENST00000541141 460 ntBASIC14.35□□□□□ -0.11
MTHFRP42898 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC14.35□□□□□ -0.11
MTHFRP42898 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC14.35□□□□□ -0.11
MTHFRP42898 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC14.35□□□□□ -0.11
MTHFRP42898 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC14.35□□□□□ -0.11
MTHFRP42898 AC233280.19-201ENST00000633223 136 ntBASIC14.35□□□□□ -0.11
MTHFRP42898 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
MTHFRP42898 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.35□□□□□ -0.11
MTHFRP42898 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
MTHFRP42898 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MTHFRP42898 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.35□□□□□ -0.11
MTHFRP42898 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MTHFRP42898 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.35□□□□□ -0.11
MTHFRP42898 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.35□□□□□ -0.11
MTHFRP42898 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MTHFRP42898 AC008620.2-201ENST00000510294 1569 ntBASIC14.34□□□□□ -0.11
MTHFRP42898 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MTHFRP42898 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.34□□□□□ -0.11
MTHFRP42898 Z98885.3-201ENST00000624882 1757 ntBASIC14.34□□□□□ -0.11
MTHFRP42898 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.34□□□□□ -0.11
MTHFRP42898 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 NQO2-204ENST00000380454 851 ntTSL 2 BASIC14.34□□□□□ -0.11
MTHFRP42898 PHBP10-201ENST00000416467 784 ntBASIC14.34□□□□□ -0.11
MTHFRP42898 AHCYP3-201ENST00000420053 1279 ntBASIC14.34□□□□□ -0.11
MTHFRP42898 MAGEA7P-201ENST00000436482 942 ntBASIC14.34□□□□□ -0.11
MTHFRP42898 HNRNPA1P10-201ENST00000444945 962 ntBASIC14.34□□□□□ -0.11
MTHFRP42898 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC14.34□□□□□ -0.11
MTHFRP42898 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC14.34□□□□□ -0.11
MTHFRP42898 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.34□□□□□ -0.11
MTHFRP42898 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC14.34□□□□□ -0.11
MTHFRP42898 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC14.34□□□□□ -0.11
MTHFRP42898 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC14.34□□□□□ -0.11
MTHFRP42898 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.34□□□□□ -0.11
MTHFRP42898 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MTHFRP42898 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.34□□□□□ -0.11
MTHFRP42898 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.34□□□□□ -0.11
MTHFRP42898 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.34□□□□□ -0.11
MTHFRP42898 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MTHFRP42898 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
MTHFRP42898 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MTHFRP42898 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
MTHFRP42898 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
MTHFRP42898 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.33□□□□□ -0.12
MTHFRP42898 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
MTHFRP42898 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MTHFRP42898 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.33□□□□□ -0.12
MTHFRP42898 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC14.33□□□□□ -0.12
MTHFRP42898 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 MIR339-201ENST00000362153 94 ntBASIC14.33□□□□□ -0.12
MTHFRP42898 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms