Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
TRIM23P36406 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRIM23P36406 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
TRIM23P36406 AL358781.1-202ENST00000321081 1360 ntBASIC13.49□□□□□ -0.25
TRIM23P36406 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 KRT18P46-201ENST00000435568 1279 ntBASIC13.49□□□□□ -0.25
TRIM23P36406 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC13.49□□□□□ -0.25
TRIM23P36406 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC13.49□□□□□ -0.25
TRIM23P36406 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC13.49□□□□□ -0.25
TRIM23P36406 RN7SL351P-201ENST00000469306 248 ntBASIC13.49□□□□□ -0.25
TRIM23P36406 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC13.49□□□□□ -0.25
TRIM23P36406 ALG1L3P-201ENST00000503331 765 ntBASIC13.49□□□□□ -0.25
TRIM23P36406 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC13.49□□□□□ -0.25
TRIM23P36406 AC087203.1-201ENST00000532111 1181 ntBASIC13.49□□□□□ -0.25
TRIM23P36406 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC13.49□□□□□ -0.25
TRIM23P36406 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC13.49□□□□□ -0.25
TRIM23P36406 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC13.49□□□□□ -0.25
TRIM23P36406 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC13.49□□□□□ -0.25
TRIM23P36406 AP005264.6-204ENST00000588436 719 ntBASIC13.49□□□□□ -0.25
TRIM23P36406 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRIM23P36406 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
TRIM23P36406 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.49□□□□□ -0.25
TRIM23P36406 DDC-212ENST00000615193 1674 ntTSL 3 BASIC13.49□□□□□ -0.25
TRIM23P36406 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.49□□□□□ -0.25
TRIM23P36406 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TRIM23P36406 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.49□□□□□ -0.25
TRIM23P36406 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
TRIM23P36406 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
TRIM23P36406 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC13.49□□□□□ -0.25
TRIM23P36406 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRIM23P36406 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.48□□□□□ -0.25
TRIM23P36406 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.48□□□□□ -0.25
TRIM23P36406 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.48□□□□□ -0.25
TRIM23P36406 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.48□□□□□ -0.25
TRIM23P36406 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
TRIM23P36406 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.48□□□□□ -0.25
TRIM23P36406 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC13.48□□□□□ -0.25
TRIM23P36406 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.48□□□□□ -0.25
TRIM23P36406 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC13.48□□□□□ -0.25
TRIM23P36406 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.48□□□□□ -0.25
TRIM23P36406 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
TRIM23P36406 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRIM23P36406 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRIM23P36406 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRIM23P36406 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TRIM23P36406 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC13.48□□□□□ -0.25
TRIM23P36406 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC13.48□□□□□ -0.25
TRIM23P36406 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC13.48□□□□□ -0.25
TRIM23P36406 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC13.48□□□□□ -0.25
TRIM23P36406 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC13.48□□□□□ -0.25
TRIM23P36406 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRIM23P36406 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRIM23P36406 AC055811.3-201ENST00000584952 686 ntBASIC13.48□□□□□ -0.25
TRIM23P36406 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
TRIM23P36406 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.48□□□□□ -0.25
TRIM23P36406 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRIM23P36406 AC011247.3-201ENST00000603297 438 ntBASIC13.48□□□□□ -0.25
TRIM23P36406 FO393412.1-201ENST00000619841 382 ntBASIC13.48□□□□□ -0.25
TRIM23P36406 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC13.48□□□□□ -0.25
TRIM23P36406 AC137723.2-201ENST00000623540 398 ntBASIC13.48□□□□□ -0.25
TRIM23P36406 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRIM23P36406 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRIM23P36406 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms