Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 MIR4763-201ENST00000581461 92 ntBASIC18.03■□□□□ 0.48
USP6P35125 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC18.03■□□□□ 0.48
USP6P35125 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC18.03■□□□□ 0.48
USP6P35125 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC18.03■□□□□ 0.48
USP6P35125 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC18.03■□□□□ 0.48
USP6P35125 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP6P35125 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP6P35125 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC18.03■□□□□ 0.48
USP6P35125 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
USP6P35125 CETP-203ENST00000566128 1733 ntTSL 5 BASIC18.03■□□□□ 0.48
USP6P35125 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC18.03■□□□□ 0.48
USP6P35125 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
USP6P35125 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC18.03■□□□□ 0.48
USP6P35125 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP6P35125 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP6P35125 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP6P35125 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP6P35125 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
USP6P35125 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP6P35125 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP6P35125 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC18.02■□□□□ 0.48
USP6P35125 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP6P35125 AC244154.1-201ENST00000620148 1555 ntBASIC18.02■□□□□ 0.48
USP6P35125 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC18.02■□□□□ 0.48
USP6P35125 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP6P35125 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
USP6P35125 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP6P35125 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC18.02■□□□□ 0.48
USP6P35125 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP6P35125 RN7SL638P-201ENST00000494527 290 ntBASIC18.02■□□□□ 0.48
USP6P35125 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC18.02■□□□□ 0.48
USP6P35125 HAX1-211ENST00000532105 771 ntTSL 3 BASIC18.02■□□□□ 0.48
USP6P35125 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC18.02■□□□□ 0.48
USP6P35125 AL033381.2-201ENST00000603854 732 ntBASIC18.02■□□□□ 0.48
USP6P35125 AL078624.1-201ENST00000604004 547 ntBASIC18.02■□□□□ 0.48
USP6P35125 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP6P35125 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP6P35125 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC18.02■□□□□ 0.48
USP6P35125 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
USP6P35125 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP6P35125 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP6P35125 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP6P35125 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.02■□□□□ 0.47
USP6P35125 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP6P35125 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
USP6P35125 OS9-204ENST00000389146 2091 ntTSL 2 BASIC18.02■□□□□ 0.47
USP6P35125 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC18.02■□□□□ 0.47
USP6P35125 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
USP6P35125 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
USP6P35125 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP6P35125 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP6P35125 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP6P35125 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.01■□□□□ 0.47
USP6P35125 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP6P35125 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP6P35125 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP6P35125 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP6P35125 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP6P35125 STX3-207ENST00000633708 3111 ntTSL 5 BASIC18.01■□□□□ 0.47
USP6P35125 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP6P35125 CD9-212ENST00000610354 1315 ntTSL 5 BASIC18.01■□□□□ 0.47
USP6P35125 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP6P35125 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP6P35125 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP6P35125 KRT8P6-201ENST00000399259 1207 ntBASIC18.01■□□□□ 0.47
USP6P35125 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC18.01■□□□□ 0.47
USP6P35125 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC18.01■□□□□ 0.47
USP6P35125 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC18.01■□□□□ 0.47
USP6P35125 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC18.01■□□□□ 0.47
USP6P35125 AL137779.3-201ENST00000553295 729 ntBASIC18.01■□□□□ 0.47
USP6P35125 EEF1DP7-201ENST00000580496 513 ntBASIC18.01■□□□□ 0.47
USP6P35125 AL031768.1-201ENST00000606542 701 ntBASIC18.01■□□□□ 0.47
USP6P35125 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC18.01■□□□□ 0.47
USP6P35125 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC18.01■□□□□ 0.47
USP6P35125 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.01■□□□□ 0.47
USP6P35125 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC18.01■□□□□ 0.47
USP6P35125 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP6P35125 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
USP6P35125 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
USP6P35125 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP6P35125 AC099063.4-201ENST00000641099 1602 ntBASIC18.01■□□□□ 0.47
USP6P35125 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.01■□□□□ 0.47
USP6P35125 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC18.01■□□□□ 0.47
USP6P35125 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
USP6P35125 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC18.01■□□□□ 0.47
USP6P35125 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
USP6P35125 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
USP6P35125 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC18■□□□□ 0.47
USP6P35125 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC18■□□□□ 0.47
USP6P35125 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 DDC-214ENST00000622873 1839 ntTSL 3 BASIC18■□□□□ 0.47
USP6P35125 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 AL954722.1-201ENST00000431238 259 ntBASIC18■□□□□ 0.47
USP6P35125 AKR1C6P-201ENST00000432950 983 ntBASIC18■□□□□ 0.47
USP6P35125 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC18■□□□□ 0.47
USP6P35125 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
USP6P35125 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms