Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
CD74P04233 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC11.57□□□□□ -0.56
CD74P04233 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 AC005154.3-201ENST00000419639 1393 ntBASIC11.57□□□□□ -0.56
CD74P04233 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC11.57□□□□□ -0.56
CD74P04233 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 AFG3L2P1-201ENST00000521792 1763 ntBASIC11.57□□□□□ -0.56
CD74P04233 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 AC092117.1-201ENST00000621230 3250 ntBASIC11.57□□□□□ -0.56
CD74P04233 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
CD74P04233 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 MIR1202-201ENST00000408529 83 ntBASIC11.57□□□□□ -0.56
CD74P04233 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC11.57□□□□□ -0.56
CD74P04233 AC016694.1-201ENST00000434179 700 ntBASIC11.57□□□□□ -0.56
CD74P04233 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.57□□□□□ -0.56
CD74P04233 FTH1P14-201ENST00000482930 551 ntBASIC11.57□□□□□ -0.56
CD74P04233 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.57□□□□□ -0.56
CD74P04233 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC11.57□□□□□ -0.56
CD74P04233 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.57□□□□□ -0.56
CD74P04233 KRT90P-201ENST00000549264 1064 ntBASIC11.57□□□□□ -0.56
CD74P04233 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC11.57□□□□□ -0.56
CD74P04233 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC11.57□□□□□ -0.56
CD74P04233 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC11.57□□□□□ -0.56
CD74P04233 MIR4687-201ENST00000583618 80 ntBASIC11.57□□□□□ -0.56
CD74P04233 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.57□□□□□ -0.56
CD74P04233 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11.57□□□□□ -0.56
CD74P04233 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 AL096865.1-201ENST00000606796 927 ntBASIC11.57□□□□□ -0.56
CD74P04233 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC11.57□□□□□ -0.56
CD74P04233 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 ERG-211ENST00000453032 1595 ntTSL 2 BASIC11.57□□□□□ -0.56
CD74P04233 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC11.57□□□□□ -0.56
CD74P04233 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC11.57□□□□□ -0.56
CD74P04233 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.57□□□□□ -0.56
CD74P04233 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC11.57□□□□□ -0.56
CD74P04233 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
CD74P04233 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.57□□□□□ -0.56
CD74P04233 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC11.57□□□□□ -0.56
CD74P04233 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CD74P04233 AC004554.1-201ENST00000422830 1468 ntBASIC11.57□□□□□ -0.56
CD74P04233 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CD74P04233 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CD74P04233 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CD74P04233 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC11.56□□□□□ -0.56
CD74P04233 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC11.56□□□□□ -0.56
CD74P04233 AL031587.5-201ENST00000624344 1849 ntBASIC11.56□□□□□ -0.56
CD74P04233 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 AC145098.2-201ENST00000623593 3026 ntBASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms