Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 THAP4-203ENST00000402545 833 ntTSL 5 BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 AL929472.4-201ENST00000447422 691 ntBASIC15.11■□□□□ 0.01
LOC285556D6RIA3 VTI1BP1-201ENST00000486325 700 ntBASIC15.11■□□□□ 0.01
LOC285556D6RIA3 BCRP5-201ENST00000514371 253 ntBASIC15.11■□□□□ 0.01
LOC285556D6RIA3 RN7SKP195-201ENST00000516587 303 ntBASIC15.11■□□□□ 0.01
LOC285556D6RIA3 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC15.11■□□□□ 0.01
LOC285556D6RIA3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 AL022323.5-201ENST00000624101 2059 ntBASIC15.1■□□□□ 0.01
LOC285556D6RIA3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 HRC-203ENST00000595625 2044 ntTSL 5 BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 AC026884.1-201ENST00000418296 457 ntBASIC15.1■□□□□ 0.01
LOC285556D6RIA3 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 AC069181.1-201ENST00000498256 554 ntBASIC15.1■□□□□ 0.01
LOC285556D6RIA3 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 F2-205ENST00000530231 1849 ntTSL 5 BASIC15.1■□□□□ 0.01
LOC285556D6RIA3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 IMPDH1P5-201ENST00000439688 1540 ntBASIC15.09■□□□□ 0.01
LOC285556D6RIA3 DDX12P-201ENST00000432996 2947 ntBASIC15.09■□□□□ 0.01
LOC285556D6RIA3 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 CMC2-202ENST00000486645 766 ntTSL 3 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 AC079601.2-201ENST00000547729 775 ntBASIC15.09■□□□□ 0.01
LOC285556D6RIA3 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 AC009779.7-201ENST00000609031 469 ntBASIC15.09■□□□□ 0.01
LOC285556D6RIA3 MIR6165-201ENST00000614803 84 ntBASIC15.09■□□□□ 0.01
LOC285556D6RIA3 AL592295.4-201ENST00000636161 997 ntTSL 4 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 AC007686.3-201ENST00000619017 3487 ntBASIC15.09■□□□□ 0.01
LOC285556D6RIA3 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 CICP9-201ENST00000444451 1913 ntBASIC15.09■□□□□ 0.01
LOC285556D6RIA3 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms