Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC089987.1-201ENST00000551654 2209 ntBASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 RN7SL684P-201ENST00000465665 294 ntBASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 AC093700.1-201ENST00000503348 717 ntBASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 ACY3-202ENST00000529256 933 ntTSL 3 BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 PHBP18-201ENST00000546648 813 ntBASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 MIR5091-201ENST00000578707 93 ntBASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 PRR20FP-201ENST00000603320 180 ntBASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 AC123912.6-201ENST00000612657 315 ntBASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 AC245369.7-201ENST00000631386 350 ntBASIC12.96□□□□□ -0.33
CCDC187A0A096LP49 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC187A0A096LP49 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC187A0A096LP49 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC187A0A096LP49 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CCDC187A0A096LP49 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC187A0A096LP49 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC187A0A096LP49 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 FMO6P-201ENST00000236166 1620 ntBASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 PTENP1-202ENST00000532280 3996 ntBASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 AC004522.1-201ENST00000419978 654 ntBASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 AL359092.2-201ENST00000423330 585 ntBASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 AC005077.3-201ENST00000449614 213 ntBASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 HNRNPA1P42-201ENST00000458678 957 ntBASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 ALG1L15P-201ENST00000482834 794 ntBASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 AC008494.1-201ENST00000497612 796 ntBASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 AC099328.1-201ENST00000498809 1030 ntBASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 AC113347.2-201ENST00000512350 279 ntBASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 FTLP5-201ENST00000586853 534 ntBASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 AC110057.1-201ENST00000636031 898 ntBASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 KRT8P38-201ENST00000441370 1430 ntBASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC187A0A096LP49 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 LINC02486-201ENST00000604157 3000 ntBASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC187A0A096LP49 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms