Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 FNTAP2-201ENST00000430308 634 ntBASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 AC006335.1-201ENST00000445200 547 ntBASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 PFN2-206ENST00000461930 606 ntTSL 4 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 AC116345.2-201ENST00000512837 523 ntBASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 AC005740.1-201ENST00000515639 522 ntBASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 AC015967.2-201ENST00000624092 234 ntBASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 AC006435.4-201ENST00000625037 234 ntBASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 AL356737.1-201ENST00000634391 234 ntBASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HLA-DRB4X5D2U9 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 AC004554.1-201ENST00000422830 1468 ntBASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 ELK2AP-201ENST00000392510 1007 ntBASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 RN7SL11P-201ENST00000471305 293 ntBASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 ALG1L13P-202ENST00000519320 584 ntBASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 RN7SL774P-201ENST00000577467 290 ntBASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 RN7SL455P-201ENST00000580629 282 ntBASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 HPN-206ENST00000597419 1212 ntTSL 5 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 LINC01783-202ENST00000614408 828 ntBASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 BX284668.2-205ENST00000619677 828 ntBASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 AC079336.7-201ENST00000623428 1078 ntBASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 AL139424.3-202ENST00000641619 917 ntBASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms