Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC079779.3-201ENST00000588842 1200 ntTSL 5 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 MIR6131-201ENST00000611729 109 ntBASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 RN7SL1-201ENST00000618786 299 ntBASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 TIRAP-202ENST00000392679 2195 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 PTAR1-201ENST00000340434 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 TCEA3-203ENST00000450454 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 ZFX-AS1-201ENST00000427551 417 ntTSL 3 BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 HTR3D-203ENST00000428798 1215 ntTSL 5 BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 DICER1-AS1-201ENST00000435343 723 ntTSL 3 BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 LINC02521-201ENST00000440848 834 ntTSL 2 BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 HTR3D-204ENST00000453435 1043 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 RN7SL40P-201ENST00000474689 342 ntBASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 AP003392.3-201ENST00000531886 667 ntTSL 5 BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 GPHA2-203ENST00000533257 582 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 AC006974.2-201ENST00000637240 1227 ntTSL 5 BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 RPS20P22-202ENST00000488192 1318 ntBASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RIMBP3Q9UFD9 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 C1orf94-201ENST00000373374 2136 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 AL109954.1-202ENST00000564051 2148 ntBASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 AL390728.2-201ENST00000400933 1670 ntBASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 ELOVL3-201ENST00000370005 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 CYB5A-201ENST00000299438 718 ntTSL 2 BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 SLC25A14-203ENST00000361980 969 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 RPL3P7-201ENST00000417878 1212 ntBASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 AC007128.2-201ENST00000435967 557 ntTSL 4 BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 YBX1P7-201ENST00000436766 535 ntBASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 SLC10A7-205ENST00000507030 1134 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 AL645949.2-201ENST00000513434 786 ntBASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 AC025257.1-201ENST00000550926 375 ntTSL 3 BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 AC067969.1-201ENST00000595853 552 ntTSL 5 BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 FP671120.4-201ENST00000629969 923 ntBASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 GNG14-202ENST00000640151 425 ntBASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 SLC16A7-216ENST00000552432 2250 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 MTHFR-210ENST00000641407 2387 ntBASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC20.47■□□□□ 0.87
RIMBP3Q9UFD9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 PLP2-202ENST00000376327 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 AL021068.1-201ENST00000392097 911 ntBASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 ATP5G1-204ENST00000503641 539 ntTSL 3 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 AC127496.2-201ENST00000576859 368 ntTSL 3 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 SLIRP-212ENST00000613856 420 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 PASK-216ENST00000629419 216 ntTSL 5 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 SEMA6A-205ENST00000503865 1678 ntTSL 2 BASIC20.46■□□□□ 0.87
RIMBP3Q9UFD9 HRH2-201ENST00000231683 1080 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
RIMBP3Q9UFD9 MLN-201ENST00000266003 527 ntTSL 5 BASIC20.45■□□□□ 0.87
RIMBP3Q9UFD9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
RIMBP3Q9UFD9 KRT18P50-201ENST00000404337 1243 ntBASIC20.45■□□□□ 0.87
RIMBP3Q9UFD9 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC20.45■□□□□ 0.87
RIMBP3Q9UFD9 LINC01621-201ENST00000438797 481 ntTSL 5 BASIC20.45■□□□□ 0.87
RIMBP3Q9UFD9 AC112492.3-201ENST00000457557 1031 ntBASIC20.45■□□□□ 0.87
RIMBP3Q9UFD9 RN7SL831P-201ENST00000460344 319 ntBASIC20.45■□□□□ 0.87
RIMBP3Q9UFD9 HNRNPCP6-201ENST00000525816 871 ntBASIC20.45■□□□□ 0.87
RIMBP3Q9UFD9 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC20.45■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms