Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC21■□□□□ 0.95
VPS8Q8N3P4 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
VPS8Q8N3P4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VPS8Q8N3P4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VPS8Q8N3P4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
VPS8Q8N3P4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
VPS8Q8N3P4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
VPS8Q8N3P4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
VPS8Q8N3P4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
VPS8Q8N3P4 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC21■□□□□ 0.95
VPS8Q8N3P4 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC21■□□□□ 0.95
VPS8Q8N3P4 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC21■□□□□ 0.95
VPS8Q8N3P4 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC21■□□□□ 0.95
VPS8Q8N3P4 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC21■□□□□ 0.95
VPS8Q8N3P4 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC21■□□□□ 0.95
VPS8Q8N3P4 CCND3P2-201ENST00000579393 537 ntBASIC21■□□□□ 0.95
VPS8Q8N3P4 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC21■□□□□ 0.95
VPS8Q8N3P4 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
VPS8Q8N3P4 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC21■□□□□ 0.95
VPS8Q8N3P4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VPS8Q8N3P4 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
VPS8Q8N3P4 KRT8P5-201ENST00000592443 1458 ntBASIC21■□□□□ 0.95
VPS8Q8N3P4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC21■□□□□ 0.95
VPS8Q8N3P4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
VPS8Q8N3P4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
VPS8Q8N3P4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC21■□□□□ 0.95
VPS8Q8N3P4 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
VPS8Q8N3P4 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 FAM183BP-201ENST00000409072 1595 ntBASIC20.99■□□□□ 0.95
VPS8Q8N3P4 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 VENTXP4-201ENST00000449029 958 ntBASIC20.99■□□□□ 0.95
VPS8Q8N3P4 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 DUT-207ENST00000559416 635 ntTSL 2 BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 RN7SL605P-201ENST00000577229 281 ntBASIC20.99■□□□□ 0.95
VPS8Q8N3P4 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 C2orf27AP1-201ENST00000618128 586 ntBASIC20.99■□□□□ 0.95
VPS8Q8N3P4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS8Q8N3P4 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 FAM226B-201ENST00000602508 1490 ntBASIC20.98■□□□□ 0.95
VPS8Q8N3P4 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 AC008038.1-201ENST00000634247 1314 ntBASIC20.98■□□□□ 0.95
VPS8Q8N3P4 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 IGHEP2-201ENST00000519308 1256 ntBASIC20.98■□□□□ 0.95
VPS8Q8N3P4 AC012146.4-201ENST00000575546 271 ntBASIC20.98■□□□□ 0.95
VPS8Q8N3P4 TLE2-205ENST00000586422 389 ntTSL 5 BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 AC019294.4-201ENST00000561777 2905 ntBASIC20.98■□□□□ 0.95
VPS8Q8N3P4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 AC010970.1-201ENST00000445125 1848 ntBASIC20.98■□□□□ 0.95
VPS8Q8N3P4 NORAD-201ENST00000565493 5339 ntBASIC20.98■□□□□ 0.95
VPS8Q8N3P4 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 AC073862.3-201ENST00000624597 1648 ntBASIC20.98■□□□□ 0.95
VPS8Q8N3P4 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS8Q8N3P4 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms