Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 PDXDC2P-206ENST00000534700 1315 ntBASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM48Q8IWZ4 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 AL139424.3-202ENST00000641619 917 ntBASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 AC105206.1-202ENST00000314927 2368 ntBASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 AC019109.1-201ENST00000401725 1874 ntBASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM48Q8IWZ4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
TRIM48Q8IWZ4 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM48Q8IWZ4 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM48Q8IWZ4 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM48Q8IWZ4 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRIM48Q8IWZ4 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM48Q8IWZ4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TRIM48Q8IWZ4 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC13.6□□□□□ -0.23
TRIM48Q8IWZ4 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.6□□□□□ -0.23
TRIM48Q8IWZ4 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC13.6□□□□□ -0.23
TRIM48Q8IWZ4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TRIM48Q8IWZ4 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRIM48Q8IWZ4 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRIM48Q8IWZ4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM48Q8IWZ4 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM48Q8IWZ4 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms