Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 AC064801.2-201ENST00000625052 1303 ntBASIC14.66□□□□□ -0.06
RNF135Q8IUD6 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 AC019109.1-201ENST00000401725 1874 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 AC067931.2-201ENST00000623655 2003 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 AL365181.1-201ENST00000564032 1828 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 SNORA57-201ENST00000383870 149 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 OR10N1P-201ENST00000392758 869 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 AL157823.1-201ENST00000403727 628 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 IFNWP2-201ENST00000431203 580 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 RN7SL128P-201ENST00000467883 305 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 HNRNPA1P56-201ENST00000505767 954 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 EEF1GP8-201ENST00000506566 1154 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 RN7SKP155-201ENST00000516031 288 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 MIR2278-201ENST00000516344 96 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 NEK4P3-201ENST00000604859 544 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 AL009176.1-201ENST00000607876 650 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 ODCP-201ENST00000459650 1639 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 AC016397.2-201ENST00000624848 1985 ntBASIC14.65□□□□□ -0.06
RNF135Q8IUD6 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.65□□□□□ -0.06
RNF135Q8IUD6 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.65□□□□□ -0.07
RNF135Q8IUD6 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms